Merge branch 'releases/Release_2_11_3_Branch'

[jalview.git] / examples / groovy / printtitle.groovy

diff --git a/examples/groovy/printtitle.groovy b/examples/groovy/printtitle.groovy
index 8fe91db..a048d65 100644 (file)
--- a/examples/groovy/printtitle.groovy
+++ b/examples/groovy/printtitle.groovy
@@ -1,12 +1,35 @@
-// do something groovy in jalview\r
-print "Hello World.\n";\r
-def alf = Jalview.getAlignframes();\r
-for (ala in alf)\r
-{\r
-       // ala is an jalview.gui.AlignFrame object \r
-       print ala.getTitle()+"\n";\r
-       // get the parent jalview.datamodel.Alignment from the alignment viewport\r
-       def alignment = ala.viewport.alignment;\r
-       // get the first sequence from the jalview.datamodel.Alignment object\r
-       def seq = alignment.getSequenceAt(0); \r
-}\r
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE.  See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+// do something groovy in jalview
+println "Hello World.\n"
+println "First sequence is " + Jalview.getCurrentAlignFrame().viewport.alignment.getSequenceAt(0).getDisplayId(true)
+
+def alf = Jalview.getAlignFrames()
+for (ala in alf)
+{
+       // ala is an jalview.gui.AlignFrame object
+       println ala.getTitle()
+       // get the parent jalview.datamodel.Alignment from the alignment viewport
+       def alignment = ala.viewport.alignment
+       // get the first sequence from the jalview.datamodel.Alignment object
+       def seq = alignment.getSequenceAt(0)
+}
+Jalview.quit()