Merge branch 'releases/Release_2_11_3_Branch'

[jalview.git] / examples / groovy / printtitle.groovy

diff --git a/examples/groovy/printtitle.groovy b/examples/groovy/printtitle.groovy
index b3387ea..a048d65 100644 (file)
--- a/examples/groovy/printtitle.groovy
+++ b/examples/groovy/printtitle.groovy
@@ -1,35 +1,35 @@
 /*
  * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
  * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
+ *
  * This file is part of Jalview.
- * 
+ *
  * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
+ * modify it under the terms of the GNU General Public License
  * as published by the Free Software Foundation, either version 3
  * of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  * PURPOSE.  See the GNU General Public License for more details.
- * 
+ *
  * You should have received a copy of the GNU General Public License
  * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 // do something groovy in jalview
 println "Hello World.\n"
-println "First sequence is " + currentAlFrame.viewport.alignment.getSequenceAt(0).getDisplayId(true)
+println "First sequence is " + Jalview.getCurrentAlignFrame().viewport.alignment.getSequenceAt(0).getDisplayId(true)
 
 def alf = Jalview.getAlignFrames()
 for (ala in alf)
 {
-       // ala is an jalview.gui.AlignFrame object 
+       // ala is an jalview.gui.AlignFrame object
        println ala.getTitle()
        // get the parent jalview.datamodel.Alignment from the alignment viewport
        def alignment = ala.viewport.alignment
        // get the first sequence from the jalview.datamodel.Alignment object
-       def seq = alignment.getSequenceAt(0) 
+       def seq = alignment.getSequenceAt(0)
 }
 Jalview.quit()