--- /dev/null
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+-->
+
+<ul id="menu" class="menu">
+ <li id="applets" class="first leaf menu-mlid-1001">
+ <a id="applets" href="javascript:doSubmit('applets')" class=" ">JalviewLite Examples</a></li>
+
+ <li id="jalviewLiteJs" class="leaf menu-mlid-1002">
+ <a id="jalviewLiteJs" href="javascript:doSubmit('jalviewLiteJs')" class=" ">Javascript API</a></li>
+
+ <li id="appletParameters" class="leaf menu-mlid-1003">
+ <a id="appletParameters" href="javascript:doSubmit('appletParameters')" class=" ">Applet Parameters</a></li>
+
+ <li id="embedded" class="leaf menu-mlid-1004">
+ <a id="embedded" href="javascript:doSubmit('embedded')" class=" ">Embedded Alignment</a></li>
+
+ <li id="embeddedWJmol" class="leaf menu-mlid-1005">
+ <a id="embeddedWJmol" href="javascript:doSubmit('embeddedWJmol')" class=" ">Jalview and Jmol</a></li>
+
+ <li id="formComplete" class="leaf menu-mlid-1006">
+ <a id="formComplete" href="javascript:doSubmit('formComplete')" class=" ">Access from Javascript</a></li>
+
+ <li id="javascriptLaunch" class="leaf menu-mlid-1007">
+ <a id="javascriptLaunch" href="javascript:doSubmit('javascriptLaunch')" class=" ">Javascript Launch</a></li>
+
+ <li id="linkedapplets_ng" class="last leaf menu-mlid-1008">
+ <a id="linkedapplets_ng" href="javascript:doSubmit('linkedapplets_ng')" class=" ">Linked JalviewLites</a></li>
+ </ul>
+