Merge branch 'develop' into spike/JAL-4047/JAL-4048_columns_in_sequenceID

[jalview.git] / examples / test_fab41.result / argfile.txt

diff --git a/examples/test_fab41.result/argfile.txt b/examples/test_fab41.result/argfile.txt
new file mode 100644 (file)
index 0000000..52d68ee
--- /dev/null
+++ b/examples/test_fab41.result/argfile.txt
@@ -0,0 +1,24 @@
+--debug
+--nonews
+--nosplash
+--noannotation
+--substitutions
+--open={argfiledirname}/sample.a2m
+--colour=gecos:flower
+--structure={dirname}/test_fab41_unrelaxed_rank_1_model_3.pdb
+--paematrix={dirname}/test_fab41_unrelaxed_rank_1_model_3_scores.json
+--tempfac=plddt
+--structure={dirname}/test_fab41_unrelaxed_rank_2_model_4.pdb
+--paematrix={dirname}/test_fab41_unrelaxed_rank_2_model_4_scores.json
+--tempfac=plddt
+--structure={dirname}/test_fab41_unrelaxed_rank_3_model_2.pdb
+--paematrix={dirname}/test_fab41_unrelaxed_rank_3_model_2_scores.json
+--tempfac=plddt
+--structure={dirname}/test_fab41_unrelaxed_rank_4_model_5.pdb
+--paematrix={dirname}/test_fab41_unrelaxed_rank_4_model_5_scores.json
+--tempfac=plddt
+--structure={dirname}/test_fab41_unrelaxed_rank_5_model_1.pdb
+--tempfac=plddt
+--paematrix={dirname}/test_fab41_unrelaxed_rank_5_model_1_scores.json
+--image={dirname}/{basename}.html
+#--headless