--- /dev/null
+<html>
+<!--
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+<head>
+<title>Cursor Mode</title>
+</head>
+<body>
+ <p>
+ <strong>Cursor Mode</strong>
+ </p>
+ <p>Cursor mode is a new feature in Jalview 2.08, and allows more
+ precise selection and editing of alignments through the use of the
+ keyboard for both navigation and the input of editing and selection
+ commands.</p>
+ <p>
+ <em>F2</em> Toggles between normal and cursor editing modes. When in
+ cursor mode, a black cursor appears in the residue area of the
+ alignment, and any mouse clicks on that area will move the cursor to
+ that position (this means that the region selection menu is
+ unavailable in cursor mode).
+ </p>
+ <p>
+ <b>Navigation</b>
+ <ul>
+ <li>Cursor keys - Move cursor around the alignment.</li>
+ </ul>
+ <ul>
+ <li>S - Type a number x then press 'S' to jump to sequence x.</li>
+ </ul>
+ <ul>
+ <li>C - Type a number x then press 'C' to jump to column x.</li>
+ </ul>
+ <ul>
+ <li>P - Type a number x then press 'P' to jump to position x in
+ current sequence.</li>
+ </ul>
+ <ul>
+ <li>65,82<return> - Quick jump to column 65, sequence 82</li>
+ </ul>
+ </p>
+ <p>
+ <b>Defining Regions</b>
+ <ul>
+ <li>Q - Define the top left corner of the selection area</li>
+ </ul>
+ <ul>
+ <li>M - Define the bottom right corner of the selection area<br>
+ </li>
+ </ul>
+ <p>
+ <b>Editing The Alignment</b>
+ <ul>
+ <li>Space - Insert a gap at the cursor position. <br> To
+ insert 12 spaces at the current cursor, type 12 before pressing
+ Space.<br> To group insert, hold control or shift together
+ with space.
+ </li>
+ </ul>
+ <ul>
+ <li>Delete (or backspace) - Delete a gap at the cursor
+ position.<br> To delete 12 spaces at the current cursor, type
+ 12 before pressing Delete (or backspace).<br> To group
+ delete, hold down control or shift together with Delete (or
+ backspace).
+ </li>
+ </ul>
+ </p>
+</body>
+</html>
git://source.jalview.org / jalview.git / blobdiff