JAL-3741 http to https (and jar to jvp for exampleFile defaults!)

[jalview.git] / help / help / html / index.html

diff --git a/help/help/html/index.html b/help/help/html/index.html
index 442c508..a6bb1b6 100755 (executable)
--- a/help/help/html/index.html
+++ b/help/help/html/index.html
@@ -45,7 +45,7 @@
   <p>
     For more information, you might also want to take a look at the
     documentation section of the Jalview website (<a
-      href="http://www.jalview.org/about/documentation">http://www.jalview.org/about/documentation</a>).
+      href="https://www.jalview.org/about/documentation">https://www.jalview.org/about/documentation</a>).
   </p>
   <p>
     If you are using the Jalview Desktop application and are looking for
@@ -54,9 +54,14 @@
     google the online version of these pages. If you don't find what you
     are looking for, or want to report a bug or make a feature request,
     then get in contact over at <a
-      href="http://www.jalview.org/community">http://www.jalview.org/community</a>
+      href="https://www.jalview.org/community">https://www.jalview.org/community</a>
+  </p>
+  <p>
+    <strong>Logging, troubleshooting and reporting bugs</strong><br />If
+    something seems to be wrong with your Jalview installation, or you
+    think you've found a problem, take a look at <a href="logging.html">Jalview's
+      logging and bug reporting</a> documentation.
   </p>
-
   <p>
     <strong>Citing Jalview</strong><br />If you use Jalview in your
     work, please cite the Jalview 2 paper in Bioinformatics: