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<body>
<p>
- <strong>Welcome to Jalview Version $$Version-Rel$$ !!</strong> <br />Please
- take a look at the <a href="releases.html#Jalview.$$Version-Rel$$">release
- notes</a> for this build. Read on for the highlights.
+ <strong>Welcome to Jalview Version $$Version-Rel$$ !!</strong><br/>
</p>
<p>
- <strong>Highlights in 2.11.2</strong>
- </p>
- <p>
- <strong>New features for working with 3D Structure</strong><br />
- Jalview 2.11.2 features a number of new capabilities described
- below.
+ This Jalview release provides support for two popular 3D structure
+ visualisation tools, new features for discovery of 3D structures,
+ improved platform integration and a new command line tool allowing
+ Jalview to be more easily called from scripts.
</p>
<p>
href="https://doi.org/10.1093/bioinformatics/btm329">doi:10.1093/bioinformatics/btm329</a>).<br /> <br />
The <a href="features/preferences.html#structure">Structures
Preferences tab</a> provides new options allowing ChimeraX and
- Pymol to be used for visualising external 3D structures. Jalview
- 2.11.2 has been tested with Pymol 2.5.0 (community) and 2.5.2
- (incentive). For ChimeraX, we recommend using v1.3 or later.<br />Views
+ Pymol to be used for visualising external 3D structures. Views
from all structure viewers are saved in Jalview Projects, allowing
them to be shared with others using Jalview 2.11.2 or later,
providing they have the same viewer installed and configured to be
- used with Jalview.
+ used with Jalview.<br/><br/>Jalview
+ 2.11.2 has been tested with <strong>Pymol 2.5.0 (community)</strong> and <strong>2.5.2
+ (incentive)</strong>. For <strong>ChimeraX, we recommend using v1.3 or later</strong>.
</p>
<p>Other highlights include:</p>
<ul>
+ <li>Import of annotated DNA and RNA loci via GenBank and EMBL
+ style flatfile</li>
<li><strong>Easier configuration of <a
href="features/preferences.html#startup">Jalview's memory
allocation</a></strong></li>
- <li>Import of annotated DNA and RNA loci via GenBank and EMBL
- style flatfile</li>
<li>Scripts for <a href="features/commandline.html">running
Jalview via the command line</a> on macOS, Linux/Unix and Windows.
</li>
href="releases.html#Jalview.2.11.2.0">the Jalview 2.11.2.0
release notes</a>.
</p>
- <p>
- <strong>Known Issues</strong>
- </p>
+ <p>
+ <strong>Known Issues</strong> <br />The following known issues will
+ be addressed in a minor patch release.
+
+ <ul>
+ <li>Display of RESNUM sequence features are not suppressed when
+ structures associated with a sequence are viewed with an external
+ viewer (Regression from 2.11.1 series)</li>
+ </ul>
<p></p>
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git://source.jalview.org / jalview.git / blobdiff