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Merge branch 'develop' into task/JAL-2196pdbeProperties
[jalview.git] / help / html / groovy / featureCounter.html
diff --git a/help/html/groovy/featureCounter.html b/help/html/groovy/featureCounter.html
index fe848a9..2ebaf45 100644 (file)
--- a/help/html/groovy/featureCounter.html
+++ b/help/html/groovy/featureCounter.html
@@ -25,18 +25,25 @@
 <body>
   <p>
     <strong>Extending Jalview with Groovy - A customisable
-      feature counter</strong><br /> 
-    <br />The groovy script below shows how to add a new calculation
-    track to a Jalview alignment window.</p><p>As currently written, it will
-    add two tracks to a protein alignment view which count Pfam features
-    in each column, and ones where a charge residue also occur.</p><p>To try
-    it for yourself:</p><ol><li>Copy and paste it into the groovy script
-    console</li><li>Load the example Feredoxin project (the one that opens
-    by default when you first launched Jalview)</li><li>Select <strong>Calculations&#8594;Execute
-      Groovy Script</strong> from the alignment window's menu bar to run the script on
-    the current view.</li></ol>
+      feature counter</strong><br /> <br />The groovy script below shows how to
+    add a new calculation track to a Jalview alignment window.
+  </p>
+  <p>As currently written, it will add two tracks to a protein
+    alignment view which count Pfam features in each column, and ones
+    where a charge residue also occur.</p>
+  <p>To try it for yourself:</p>
+  <ol>
+    <li>Copy and paste it into the groovy script console</li>
+    <li>Load the example Feredoxin project (the one that opens by
+      default when you first launched Jalview)</li>
+    <li>Select <strong>Calculations&#8594;Execute Groovy
+        Script</strong> from the alignment window's menu bar to run the script on
+      the current view.
+    </li>
+  </ol>
   <em><a
-      href="http://www.jalview.org/examples/groovy/featureCounter.groovy">http://www.jalview.org/examples/groovy/featureCounter.groovy</a> - rendered with <a href="http://hilite.me">hilite.me</a></em>
+    href="http://www.jalview.org/examples/groovy/featureCounter.groovy">http://www.jalview.org/examples/groovy/featureCounter.groovy</a>
+    - rendered with <a href="http://hilite.me">hilite.me</a></em>
   <!-- HTML generated using hilite.me -->
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