JAL-1264 help updates for show/hide annotations on

[jalview.git] / help / html / menus / alignmentMenu.html

diff --git a/help/html/menus/alignmentMenu.html b/help/html/menus/alignmentMenu.html
index f219269..a7cb733 100755 (executable)
--- a/help/html/menus/alignmentMenu.html
+++ b/help/html/menus/alignmentMenu.html
@@ -112,7 +112,7 @@
                                </li>
                                <li><strong>Load Associated Tree<br> </strong><em>Jalview
                                                can <a href="../calculations/treeviewer.html">view trees</a>
-                                               stored in the Newick file format, and associate them with the
+                                                stored in the Newick file format, and associate them with the
                                                alignment. Note: the ids of the tree file and your alignment MUST
                                                be the same.</em></li>
                                <li><strong>Load Features / Annotations<br> </strong><em>Load
@@ -285,6 +285,11 @@
                                                conservation calculation, quality calculation and consensus values
                                                as bar charts. </em>
                                </li>
+                         <li><strong>Show All Annotations</strong><em><br>
+                           Show all available annotations on the alignment. You can selectively hide these from the <a href="./popupMenu.html">Popup</a> 
+                           or <a href="../features/annotation.html">Annotation</a> menus. (Since Jalview 2.8.2)</em></li>
+                         <li><strong>Hide All Annotations</strong><em><br>
+                           Hide all annotations on the alignment. (Since Jalview 2.8.2)</em></li>
                                <li><strong>Autocalculated Annotation<br> </strong><em>Settings
                                        for the display of autocalculated annotation.</em>
                                        <ul>
@@ -310,7 +315,7 @@
                                <li><strong>Show Sequence Features</strong><br> <em>Show
                                                or hide sequence features on this alignment.</em>
                                </li>
-                               <li><strong><a href="../features/featuresettings.html">Seqence
+                               <li><strong><a href="../features/featuresettings.html">Sequence
                                                        Feature Settings...</a> </strong><em><br> <em>Opens the
                                                        Sequence Feature Settings dialog box to control the colour and
                                                        display of sequence features on the alignment, and configure and