JAL-3105 fix for focus transfer after window closed on OSX
[jalview.git] / help / html / releases.html
index 84a1f8e..82ec15d 100755 (executable)
@@ -70,23 +70,54 @@ li:before {
     <tr>
     <td width="60" nowrap>
       <div align="center">
-        <strong><a name="Jalview.2.10.5">2.10.5</a><br /> <em>4/09/2018</em></strong>
+        <strong><a name="Jalview.2.10.5">2.10.5</a><br /> <em>6/09/2018</em></strong>
       </div>
     </td>
     <td><div align="left">
         <em></em>
         <ul>
-        </ul>
-      </div></td>
+            <li>
+              <!-- JAL-3101 -->Default memory for Jalview webstart and
+              InstallAnywhere increased to 1G.
+            </li>
+            <li>
+              <!-- JAL-247 -->Hidden sequence markers and representative
+              sequence bolding included when exporting alignment as EPS,
+              SVG, PNG or HTML. <em>Display is configured via the
+                Format menu, or for command-line use via a jalview
+                properties file.</em>
+            </li>
+            <li>
+              <!-- JAL-3076 -->Ensembl client updated to Version 7 REST
+              API and sequence data now imported as JSON.
+            </li>
+            <li>
+              <!-- JAL-3065 -->Change in recommended way of starting
+              Jalview via a Java command line: add jars in lib directory
+              to CLASSPATH, rather than via the deprecated java.ext.dirs
+              property.
+            </li>
+          </ul>
+          <em>Development</em>
+          <ul>
+            <li>
+              <!-- JAL-3047 -->Support added to execute test suite
+              instrumented with <a href="http://openclover.org/">Open
+                Clover</a>
+            </li>
+          </ul>
+        </div></td>
     <td><div align="left">
         <em></em>
         <ul>
             <li>
-              <!-- JAL-247 -->Hidden sequence markers and representative
-              sequence bolding included when exporting alignment as EPS,
-              SVG, PNG or HTML. <em>Display of these can be
-                configured via the Format menu or in batch mode with a
-                jalview properties file.</em>
+              <!-- JAL-3104 -->Poorly scaled bar in quality annotation
+              row shown in Feredoxin Structure alignment view of example
+              alignment.
+            </li>
+            <li>
+              <!-- JAL-2854 -->Annotation obscures sequences if lots of
+              annotation displayed.
             </li>
             <li>
               <!-- JAL-3087 -->Corrupted display when switching to
@@ -103,25 +134,34 @@ li:before {
             </li>
             <li>
               <!-- JAL-3092 -->Jalview could hang when importing certain
-              types of knotted RNA secondary structure
+              types of knotted RNA secondary structure.
             </li>
             <li>
               <!-- JAL-3095 -->Sequence highlight and selection in
               trimmed VARNA 2D structure is incorrect for sequences that
-              do not start at 1
+              do not start at 1.
             </li>
             <li>
               <!-- JAL-3061 -->'.' inserted into RNA secondary structure
-              annotation when columns are inserted into an alignment
-            </li>
-            <li>
-              <!-- JAL-3061 -->'.' written into RNA secondary structure
-              annotation when writing out Stockholm format
+              annotation when columns are inserted into an alignment,
+              and when exporting as Stockholm flatfile.
             </li>
             <li>
               <!-- JAL-3053 -->Jalview annotation rows containing upper
               and lower-case 'E' and 'H' do not automatically get
-              treated as RNA secondary structure
+              treated as RNA secondary structure.
+            </li>
+            <li>
+              <!-- JAL-3105 -->Mac Users: closing a window correctly
+              transfers focus to previous window on OSX
+            </li>
+          </ul>
+          <em>Java 10 Issues</em>
+          <ul>
+            <li>
+              <!-- JAL-2988 -->OSX - Can't save new files via the File
+              or export menus by typing in a name into the Save dialog
+              box.
             </li>
           </ul>
       </div>