JAL-4004 existing releases-VERSION.md files and releases.html template

[jalview.git] / help / markdown / releases / release-2_6_1.md

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+---
+channel: release
+version: 2.6.1
+date: 2010-11-15
+---
+
+## New Features
+
+
+
+### Application
+- New warning dialog when the Jalview Desktop cannot contact web services
+- JABA service parameters for a preset are shown in service job window
+- JABA Service menu entries reworded
+
+
+## Issues Resolved
+
+- Modeller PIR IO broken - cannot correctly import a pir file emitted by Jalview
+- Existing feature settings transferred to new alignment view created from cut'n'paste
+- Improved test for mixed amino/nucleotide chains when parsing PDB files
+- Consensus and conservation annotation rows occasionally become blank for all new windows
+- Exception raised when right clicking above sequences in wrapped view mode
+
+
+### Application
+- multiple multiply aligned structure views cause cpu usage to hit 100% and computer to hang
+- Web Service parameter layout breaks for long user parameter names
+- Jaba service discovery hangs desktop if Jaba server is down