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JAL-1990 suggested revision to separate references to UI components from datamodel...
[jalview.git]
/
src
/
MCview
/
PDBCanvas.java
diff --git
a/src/MCview/PDBCanvas.java
b/src/MCview/PDBCanvas.java
index
1c7a1f7
..
c582293
100644
(file)
--- a/
src/MCview/PDBCanvas.java
+++ b/
src/MCview/PDBCanvas.java
@@
-151,7
+151,8
@@
public class PDBCanvas extends JPanel implements MouseListener,
try
{
- pdb = ssm.setMapping(seq, chains, pdbentry.getFile(), protocol);
+ pdb = ssm.setMapping(seq, chains, pdbentry.getFile(), protocol,
+ ap.alignFrame);
if (protocol.equals(jalview.io.AppletFormatAdapter.PASTE))
{