JAL-1919 updated PDBSequenceFetcherTest and JMol parser config settings to enable...

[jalview.git] / src / MCview / PDBChain.java

diff --git a/src/MCview/PDBChain.java b/src/MCview/PDBChain.java
index 3b84ee3..073772a 100755 (executable)
--- a/src/MCview/PDBChain.java
+++ b/src/MCview/PDBChain.java
@@ -357,18 +357,6 @@ public class PDBChain
       else
       {
 
-        // boolean baseDetected = false;
-        // for (Atom resAtom : resAtoms)
-        // {
-        // if (resAtom.insCode == ' ')
-        // {
-        // baseDetected = true;
-        // }
-        // }
-        // if (!baseDetected)
-        // {
-        // continue;
-        // }
       // Make a new Residue object with the new atoms vector
       residues.addElement(new Residue(resAtoms, resNumber - 1, count));
 
@@ -378,7 +366,6 @@ public class PDBChain
         SequenceFeature sf = new SequenceFeature("RESNUM", tmpat.resName
               + ":" + tmpat.resNumIns + " " + pdbid + id, "", offset
               + count, offset + count, pdbid);
-      // MCview.PDBChain.PDBFILEFEATURE);
       resFeatures.addElement(sf);
       resAnnotation.addElement(new Annotation(tmpat.tfactor));
       // Keep totting up the sequence