Merge branch 'develop' into spike/JAL-4047/JAL-4048_columns_in_sequenceID

[jalview.git] / src / jalview / analysis / GeneticCodes.java

diff --git a/src/jalview/analysis/GeneticCodes.java b/src/jalview/analysis/GeneticCodes.java
index 133cb3a..4c826b2 100644 (file)
--- a/src/jalview/analysis/GeneticCodes.java
+++ b/src/jalview/analysis/GeneticCodes.java
@@ -140,7 +140,7 @@ public final class GeneticCodes
       InputStream is = getClass().getResourceAsStream(fileName);
       if (is == null)
       {
-        System.err.println("Resource file not found: " + fileName);
+        jalview.bin.Console.errPrintln("Resource file not found: " + fileName);
         return;
       }
       BufferedReader dataIn = new BufferedReader(new InputStreamReader(is));
@@ -166,7 +166,7 @@ public final class GeneticCodes
     }
     if (codeTables.isEmpty())
     {
-      System.err.println(
+      jalview.bin.Console.errPrintln(
               "No genetic code tables loaded, check format of file "
                       + fileName);
     }
@@ -190,7 +190,7 @@ public final class GeneticCodes
       InputStream is = getClass().getResourceAsStream(fileName);
       if (is == null)
       {
-        System.err.println("Resource file not found: " + fileName);
+        jalview.bin.Console.errPrintln("Resource file not found: " + fileName);
         return;
       }
       BufferedReader dataIn = new BufferedReader(new InputStreamReader(is));
@@ -208,7 +208,7 @@ public final class GeneticCodes
           }
           else
           {
-            System.err.println(
+            jalview.bin.Console.errPrintln(
                     "Unexpected data in " + fileName + ": " + line);
           }
         }