final int close = basePair.getBP3();
// jalview.bin.Console.outPrintln("open " + open + " close " + close);
- // jalview.bin.Console.outPrintln("lastclose " + lastclose + " lastopen " + lastopen);
+ // jalview.bin.Console.outPrintln("lastclose " + lastclose + " lastopen "
+ // + lastopen);
// we're moving from right to left based on closing pair
/*
{
int popen = bps.get(j).getBP5();
- // jalview.bin.Console.outPrintln("j " + j + " popen " + popen + " lastopen "
+ // jalview.bin.Console.outPrintln("j " + j + " popen " + popen + "
+ // lastopen "
// +lastopen + " open " + open);
if ((popen < lastopen) && (popen > open))
{