Merge remote-tracking branch 'origin/releases/Release_2_10_2b1_Branch'

[jalview.git] / src / jalview / analysis / scoremodels / SmithWatermanModel.java

diff --git a/src/jalview/analysis/scoremodels/SmithWatermanModel.java b/src/jalview/analysis/scoremodels/SmithWatermanModel.java
index f88101f..ca6d279 100644 (file)
--- a/src/jalview/analysis/scoremodels/SmithWatermanModel.java
+++ b/src/jalview/analysis/scoremodels/SmithWatermanModel.java
@@ -51,8 +51,8 @@ public class SmithWatermanModel extends SimilarityScoreModel
   public MatrixI findSimilarities(AlignmentView seqData,
           SimilarityParamsI options)
   {
-    SequenceI[] sequenceString = seqData.getVisibleAlignment(
-            Comparison.GAP_SPACE).getSequencesArray();
+    SequenceI[] sequenceString = seqData
+            .getVisibleAlignment(Comparison.GAP_SPACE).getSequencesArray();
     int noseqs = sequenceString.length;
     double[][] distances = new double[noseqs][noseqs];