JAL-1780 more support for export setting for flatfile output

[jalview.git] / src / jalview / appletgui / AlignFrame.java

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 1510a14..4f7e2b9 100644 (file)
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -1341,7 +1341,6 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener,
 
     FeatureRenderer fr = this.alignPanel.cloneFeatureRenderer();
     viewport.setFeatureRenderer(fr);
-    viewport.setIncludeHiddenRegion(false);
     cap.setText(new AppletFormatAdapter(viewport).formatSequences(
             e.getActionCommand(), viewport.getAlignment(),
             viewport.getShowJVSuffix()));