JAL-2418 source formatting

[jalview.git] / src / jalview / appletgui / IdCanvas.java

diff --git a/src/jalview/appletgui/IdCanvas.java b/src/jalview/appletgui/IdCanvas.java
index 48c0c40..5eddc4f 100755 (executable)
--- a/src/jalview/appletgui/IdCanvas.java
+++ b/src/jalview/appletgui/IdCanvas.java
@@ -118,7 +118,7 @@ public class IdCanvas extends Panel implements ViewportListenerI
       ss = es - vertical;
       if (ss < ranges.getStartSeq()) // ie scrolling too fast, more than a page
                                      // at a
-                                 // time
+      // time
       {
         ss = ranges.getStartSeq();
       }
@@ -183,8 +183,8 @@ public class IdCanvas extends Panel implements ViewportListenerI
 
     // Fill in the background
     gg.setColor(Color.white);
-    Font italic = new Font(av.getFont().getName(), Font.ITALIC, av
-            .getFont().getSize());
+    Font italic = new Font(av.getFont().getName(), Font.ITALIC,
+            av.getFont().getSize());
     gg.setFont(italic);
 
     gg.fillRect(0, 0, getSize().width, getSize().height);
@@ -224,8 +224,8 @@ public class IdCanvas extends Panel implements ViewportListenerI
         continue;
       }
       // hardwired italic IDs in applet currently
-      Font italic = new Font(av.getFont().getName(), Font.ITALIC, av
-              .getFont().getSize());
+      Font italic = new Font(av.getFont().getName(), Font.ITALIC,
+              av.getFont().getSize());
       gg.setFont(italic);
       // boolean isrep=false;
       if (doHiddenCheck)
@@ -309,8 +309,8 @@ public class IdCanvas extends Panel implements ViewportListenerI
     int rowSize = av.getRanges().getViewportWidth();
 
     // hardwired italic IDs in applet currently
-    Font italic = new Font(av.getFont().getName(), Font.ITALIC, av
-            .getFont().getSize());
+    Font italic = new Font(av.getFont().getName(), Font.ITALIC,
+            av.getFont().getSize());
     gg.setFont(italic);
 
     /*
@@ -352,7 +352,8 @@ public class IdCanvas extends Panel implements ViewportListenerI
 
   void drawMarker(int i, int starty, int yoffset)
   {
-    SequenceI[] hseqs = av.getAlignment().getHiddenSequences().hiddenSequences;
+    SequenceI[] hseqs = av.getAlignment()
+            .getHiddenSequences().hiddenSequences;
     // Use this method here instead of calling hiddenSeq adjust
     // 3 times.
     int hSize = hseqs.length;
@@ -386,27 +387,36 @@ public class IdCanvas extends Panel implements ViewportListenerI
     gg.setColor(Color.blue);
     if (below)
     {
-      gg.fillPolygon(new int[] { getSize().width - avcharHeight,
-          getSize().width - avcharHeight, getSize().width }, new int[] {
-          (i - starty) * avcharHeight + yoffset,
-          (i - starty) * avcharHeight + yoffset + avcharHeight / 4,
-          (i - starty) * avcharHeight + yoffset }, 3);
+      gg.fillPolygon(
+              new int[]
+              { getSize().width - avcharHeight,
+                  getSize().width - avcharHeight, getSize().width },
+              new int[]
+              { (i - starty) * avcharHeight + yoffset,
+                  (i - starty) * avcharHeight + yoffset + avcharHeight / 4,
+                  (i - starty) * avcharHeight + yoffset },
+              3);
     }
     if (above)
     {
-      gg.fillPolygon(new int[] { getSize().width - avcharHeight,
-          getSize().width - avcharHeight, getSize().width }, new int[] {
-          (i - starty + 1) * avcharHeight + yoffset,
-          (i - starty + 1) * avcharHeight + yoffset - avcharHeight / 4,
-          (i - starty + 1) * avcharHeight + yoffset }, 3);
+      gg.fillPolygon(
+              new int[]
+              { getSize().width - avcharHeight,
+                  getSize().width - avcharHeight, getSize().width },
+              new int[]
+              { (i - starty + 1) * avcharHeight + yoffset,
+                  (i - starty + 1) * avcharHeight + yoffset
+                          - avcharHeight / 4,
+                  (i - starty + 1) * avcharHeight + yoffset },
+              3);
 
     }
   }
 
   boolean setHiddenFont(SequenceI seq)
   {
-    Font bold = new Font(av.getFont().getName(), Font.BOLD, av.getFont()
-            .getSize());
+    Font bold = new Font(av.getFont().getName(), Font.BOLD,
+            av.getFont().getSize());
 
     if (av.isReferenceSeq(seq) || av.isHiddenRepSequence(seq))
     {
@@ -433,8 +443,8 @@ public class IdCanvas extends Panel implements ViewportListenerI
   {
     String propertyName = evt.getPropertyName();
     if (propertyName.equals(ViewportRanges.STARTSEQ)
-            || (av.getWrapAlignment() && propertyName
-                    .equals(ViewportRanges.STARTRES)))
+            || (av.getWrapAlignment()
+                    && propertyName.equals(ViewportRanges.STARTRES)))
     {
       fastPaint((int) evt.getNewValue() - (int) evt.getOldValue());
     }