Merge branch 'develop' into imp/JAL-2775

[jalview.git] / src / jalview / appletgui / OverviewPanel.java

diff --git a/src/jalview/appletgui/OverviewPanel.java b/src/jalview/appletgui/OverviewPanel.java
index e74e1cd..8ce597d 100755 (executable)
--- a/src/jalview/appletgui/OverviewPanel.java
+++ b/src/jalview/appletgui/OverviewPanel.java
@@ -31,6 +31,7 @@ import java.awt.BorderLayout;
 import java.awt.CheckboxMenuItem;
 import java.awt.Cursor;
 import java.awt.Dimension;
+import java.awt.Frame;
 import java.awt.Panel;
 import java.awt.PopupMenu;
 import java.awt.event.ComponentAdapter;
@@ -200,7 +201,7 @@ public class OverviewPanel extends Panel implements Runnable,
                 av.getAlignment().getHiddenSequences(),
                 av.getAlignment().getHiddenColumns());
       }
-      ap.paintAlignment(false);
+      ap.paintAlignment(false, false);
     }
   }
 
@@ -322,6 +323,9 @@ public class OverviewPanel extends Panel implements Runnable,
     try
     {
       av.getRanges().removePropertyChangeListener(this);
+      Frame parent = (Frame) getParent();
+      parent.dispose();
+      parent.setVisible(false);
     } finally
     {
       av = null;