Merge remote-tracking branch 'origin/releases/Release_2_10_2b1_Branch'

[jalview.git] / src / jalview / appletgui / OverviewPanel.java

diff --git a/src/jalview/appletgui/OverviewPanel.java b/src/jalview/appletgui/OverviewPanel.java
index 456a38c..be552c0 100755 (executable)
--- a/src/jalview/appletgui/OverviewPanel.java
+++ b/src/jalview/appletgui/OverviewPanel.java
@@ -67,7 +67,8 @@ public class OverviewPanel extends Panel implements Runnable,
     setLayout(null);
 
     od = new OverviewDimensionsShowHidden(av.getRanges(),
-            (av.isShowAnnotation() && av.getSequenceConsensusHash() != null));
+            (av.isShowAnnotation()
+                    && av.getSequenceConsensusHash() != null));
 
     oviewCanvas = new OverviewCanvas(od, av);
     setLayout(new BorderLayout());
@@ -112,7 +113,8 @@ public class OverviewPanel extends Panel implements Runnable,
   @Override
   public void mouseClicked(MouseEvent evt)
   {
-    if ((evt.getModifiers() & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
+    if ((evt.getModifiers()
+            & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
     {
       showPopupMenu(evt);
     }
@@ -177,7 +179,8 @@ public class OverviewPanel extends Panel implements Runnable,
   @Override
   public void mouseDragged(MouseEvent evt)
   {
-    if ((evt.getModifiers() & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
+    if ((evt.getModifiers()
+            & InputEvent.BUTTON3_MASK) == InputEvent.BUTTON3_MASK)
     {
       if (!Platform.isAMac())
       {
@@ -244,8 +247,8 @@ public class OverviewPanel extends Panel implements Runnable,
   public void run()
   {
     oviewCanvas.draw(av.isShowSequenceFeatures(),
-            (av.isShowAnnotation() && av
-                    .getAlignmentConservationAnnotation() != null),
+            (av.isShowAnnotation()
+                    && av.getAlignmentConservationAnnotation() != null),
             ap.seqPanel.seqCanvas.getFeatureRenderer());
     setBoxPosition();
   }
@@ -257,9 +260,8 @@ public class OverviewPanel extends Panel implements Runnable,
    */
   private void setBoxPosition()
   {
-    od.setBoxPosition(av.getAlignment()
-.getHiddenSequences(), av
-            .getAlignment().getHiddenColumns());
+    od.setBoxPosition(av.getAlignment().getHiddenSequences(),
+            av.getAlignment().getHiddenColumns());
     repaint();
   }
 
@@ -301,15 +303,15 @@ public class OverviewPanel extends Panel implements Runnable,
     {
       showHidden = false;
       od = new OverviewDimensionsHideHidden(av.getRanges(),
-              (av.isShowAnnotation() && av
-                      .getAlignmentConservationAnnotation() != null));
+              (av.isShowAnnotation()
+                      && av.getAlignmentConservationAnnotation() != null));
     }
     else
     {
       showHidden = true;
       od = new OverviewDimensionsShowHidden(av.getRanges(),
-              (av.isShowAnnotation() && av
-                      .getAlignmentConservationAnnotation() != null));
+              (av.isShowAnnotation()
+                      && av.getAlignmentConservationAnnotation() != null));
     }
     oviewCanvas.resetOviewDims(od);
     updateOverviewImage();