}
if (cl == null && _aa.sequenceRef != null)
{
- int spos = _aa.sequenceRef.findPosition(column);
- if (spos >= _aa.sequenceRef.getStart()
- && spos <= 1 + _aa.sequenceRef.getEnd())
+ if (_aa.annotations[column] != null)
{
- cl = _aa.sequenceRef.getContactListFor(_aa, spos-_aa.sequenceRef.getStart());
+ // sequence associated
+ cl = _aa.sequenceRef.getContactListFor(_aa, column);
if (cl == null && _aa.sequenceRef.getDatasetSequence() != null)
{
- _aa.sequenceRef.getDatasetSequence().getContactListFor(_aa, spos-_aa.sequenceRef.getStart());
+ int spos = _aa.sequenceRef.findPosition(column);
+ if (spos >= _aa.sequenceRef.getStart()
+ && spos <= 1 + _aa.sequenceRef.getEnd())
+ {
+ cl = _aa.sequenceRef.getDatasetSequence().getContactListFor(_aa,
+ spos-_aa.sequenceRef.getStart());
+ }
}
}
}