import jalview.io.gff.SequenceOntologyFactory;
import jalview.io.gff.SequenceOntologyI;
+import java.util.Arrays;
import java.util.List;
import com.stevesoft.pat.Regex;
*/
public class EnsemblCdna extends EnsemblSeqProxy
{
+ private static final List<String> CROSS_REFERENCES = Arrays
+ .asList(new String[] { "Uniprot/SWISSPROT", "Uniprot/SPTREMBL" });
+
/*
* accepts ENST or ENSTG with 11 digits
* or ENSMUST or similar for other species
@Override
protected List<String> getCrossReferenceDatabases()
{
- return super.getCrossReferenceDatabases();
+ return CROSS_REFERENCES;
// 30/01/16 also found Vega_transcript, OTTT, ENS_LRG_transcript, UCSC,
// HGNC_trans_name, RefSeq_mRNA, RefSeq_mRNA_predicted
}