Merge commit 'alpha/update_2_12_for_2_11_2_series_merge^2' into HEAD

[jalview.git] / src / jalview / ext / ensembl / EnsemblInfo.java

diff --git a/src/jalview/ext/ensembl/EnsemblInfo.java b/src/jalview/ext/ensembl/EnsemblInfo.java
index 85f421d..e2d2725 100644 (file)
--- a/src/jalview/ext/ensembl/EnsemblInfo.java
+++ b/src/jalview/ext/ensembl/EnsemblInfo.java
@@ -20,6 +20,13 @@
  */
 package jalview.ext.ensembl;
 
+import java.util.Locale;
+
+import jalview.datamodel.AlignmentI;
+import jalview.datamodel.DBRefSource;
+import jalview.util.JSONUtils;
+
+import java.io.BufferedReader;
 import java.io.IOException;
 import java.net.MalformedURLException;
 import java.net.URL;
@@ -31,9 +38,6 @@ import java.util.Set;
 
 import org.json.simple.parser.ParseException;
 
-import jalview.datamodel.AlignmentI;
-import jalview.datamodel.DBRefSource;
-
 public class EnsemblInfo extends EnsemblRestClient
 {
 
@@ -92,7 +96,7 @@ public class EnsemblInfo extends EnsemblRestClient
     {
       fetchDivisions();
     }
-    return divisions.get(division.toUpperCase());
+    return divisions.get(division.toUpperCase(Locale.ROOT));
   }
 
   /**
@@ -106,7 +110,7 @@ public class EnsemblInfo extends EnsemblRestClient
     /*
      * for convenience, pre-fill ensembl.org as the domain for "ENSEMBL"
      */
-    divisions.put(DBRefSource.ENSEMBL.toUpperCase(), ensemblDomain);
+    divisions.put(DBRefSource.ENSEMBL.toUpperCase(Locale.ROOT), ensemblDomain);
     try
     {
       @SuppressWarnings("unchecked")
@@ -116,7 +120,7 @@ public class EnsemblInfo extends EnsemblRestClient
       while (rvals.hasNext())
       {
         String division = rvals.next().toString();
-        divisions.put(division.toUpperCase(), ensemblGenomesDomain);
+        divisions.put(division.toUpperCase(Locale.ROOT), ensemblGenomesDomain);
       }
     } catch (IOException | ParseException | NumberFormatException e)
     {