JAL-3076 fetch Ensembl sequence as JSON instead of Fasta

[jalview.git] / src / jalview / ext / ensembl / EnsemblXref.java

diff --git a/src/jalview/ext/ensembl/EnsemblXref.java b/src/jalview/ext/ensembl/EnsemblXref.java
index 27c448e..77768a6 100644 (file)
--- a/src/jalview/ext/ensembl/EnsemblXref.java
+++ b/src/jalview/ext/ensembl/EnsemblXref.java
@@ -88,18 +88,6 @@ class EnsemblXref extends EnsemblRestClient
     return true;
   }
 
-  @Override
-  protected String getRequestMimeType(boolean multipleIds)
-  {
-    return "application/json";
-  }
-
-  @Override
-  protected String getResponseMimeType()
-  {
-    return "application/json";
-  }
-
   /**
    * Calls the Ensembl xrefs REST endpoint and retrieves any cross-references
    * ("primary_id") for the given identifier (Ensembl accession id) and database
@@ -113,8 +101,8 @@ class EnsemblXref extends EnsemblRestClient
    */
   public List<DBRefEntry> getCrossReferences(String identifier)
   {
-    List<DBRefEntry> result = new ArrayList<DBRefEntry>();
-    List<String> ids = new ArrayList<String>();
+    List<DBRefEntry> result = new ArrayList<>();
+    List<String> ids = new ArrayList<>();
     ids.add(identifier);
 
     BufferedReader br = null;
@@ -163,7 +151,7 @@ class EnsemblXref extends EnsemblRestClient
           throws IOException
   {
     JSONParser jp = new JSONParser();
-    List<DBRefEntry> result = new ArrayList<DBRefEntry>();
+    List<DBRefEntry> result = new ArrayList<>();
     try
     {
       JSONArray responses = (JSONArray) jp.parse(br);