JAL-3187 initial refactoring towards peptide variant in tooltip

[jalview.git] / src / jalview / ext / jmol / JalviewJmolBinding.java

diff --git a/src/jalview/ext/jmol/JalviewJmolBinding.java b/src/jalview/ext/jmol/JalviewJmolBinding.java
index 8accd0d..1ceabd1 100644 (file)
--- a/src/jalview/ext/jmol/JalviewJmolBinding.java
+++ b/src/jalview/ext/jmol/JalviewJmolBinding.java
@@ -845,6 +845,8 @@ public abstract class JalviewJmolBinding extends AAStructureBindingModel
             pdbfilename);
     if (label != null)
     {
+      // change comma to pipe separator (newline token for Jmol)
+      label = label.replace(',', '|');
       StringTokenizer toks = new StringTokenizer(strInfo, " ");
       StringBuilder sb = new StringBuilder();
       sb.append("select ").append(String.valueOf(pdbResNum)).append(":")