JAL-2738 copy to spikes/mungo

[jalview.git] / src / jalview / fts / service / uniprot / UniprotFTSPanel.java

diff --git a/src/jalview/fts/service/uniprot/UniprotFTSPanel.java b/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
index ace3600..2dad2f7 100644 (file)
--- a/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
+++ b/src/jalview/fts/service/uniprot/UniprotFTSPanel.java
@@ -40,7 +40,6 @@ public class UniprotFTSPanel extends GFTSPanel
   private static String defaultFTSFrameTitle = MessageManager
           .getString("label.uniprot_sequence_fetcher");
 
-
   private static Map<String, Integer> tempUserPrefs = new HashMap<String, Integer>();
 
   private static final String UNIPROT_FTS_CACHE_KEY = "CACHE.UNIPROT_FTS";
@@ -51,8 +50,8 @@ public class UniprotFTSPanel extends GFTSPanel
     pageLimit = UniProtFTSRestClient.getInstance()
             .getDefaultResponsePageSize();
     this.seqFetcher = seqFetcher;
-    this.progressIndicator = (seqFetcher == null) ? null : seqFetcher
-            .getProgressIndicator();
+    this.progressIndicator = (seqFetcher == null) ? null
+            : seqFetcher.getProgressIndicator();
   }
 
   @Override
@@ -103,9 +102,8 @@ public class UniprotFTSPanel extends GFTSPanel
           if (resultList.getSearchSummary() != null
                   && resultList.getSearchSummary().size() > 0)
           {
-            getResultTable().setModel(
-                    FTSRestResponse.getTableModel(request,
-                            resultList.getSearchSummary()));
+            getResultTable().setModel(FTSRestResponse.getTableModel(request,
+                    resultList.getSearchSummary()));
             FTSRestResponse.configureTableColumn(getResultTable(),
                     wantedFields, tempUserPrefs);
             getResultTable().setVisible(true);
@@ -115,14 +113,12 @@ public class UniprotFTSPanel extends GFTSPanel
           totalResultSetCount = resultList.getNumberOfItemsFound();
           resultSetCount = resultList.getSearchSummary() == null ? 0
                   : resultList.getSearchSummary().size();
-          String result = (resultSetCount > 0) ? MessageManager
-                  .getString("label.results") : MessageManager
-                  .getString("label.result");
+          String result = (resultSetCount > 0)
+                  ? MessageManager.getString("label.results")
+                  : MessageManager.getString("label.result");
           if (isPaginationEnabled() && resultSetCount > 0)
           {
-            updateSearchFrameTitle(defaultFTSFrameTitle
-                    + " - "
-                    + result
+            updateSearchFrameTitle(defaultFTSFrameTitle + " - " + result
                     + " "
                     + totalNumberformatter.format((Number) (offSet + 1))
                     + " to "
@@ -130,8 +126,8 @@ public class UniprotFTSPanel extends GFTSPanel
                             .format((Number) (offSet + resultSetCount))
                     + " of "
                     + totalNumberformatter
-                            .format((Number) totalResultSetCount) + " "
-                    + " (" + (endTime - startTime) + " milli secs)");
+                            .format((Number) totalResultSetCount)
+                    + " " + " (" + (endTime - startTime) + " milli secs)");
           }
           else
           {
@@ -191,8 +187,8 @@ public class UniprotFTSPanel extends GFTSPanel
     int primaryKeyColIndex = 0;
     try
     {
-      primaryKeyColIndex = getFTSRestClient().getPrimaryKeyColumIndex(
-              wantedFields, false);
+      primaryKeyColIndex = getFTSRestClient()
+              .getPrimaryKeyColumIndex(wantedFields, false);
     } catch (Exception e)
     {
       e.printStackTrace();
@@ -200,8 +196,8 @@ public class UniprotFTSPanel extends GFTSPanel
     int[] selectedRows = getResultTable().getSelectedRows();
     for (int summaryRow : selectedRows)
     {
-      String idStr = getResultTable().getValueAt(summaryRow,
-              primaryKeyColIndex).toString();
+      String idStr = getResultTable()
+              .getValueAt(summaryRow, primaryKeyColIndex).toString();
       selectedIdsSet.add(idStr);
     }
     selectedIdsSet.addAll(paginatorCart);