JAL-4273 release notes for visible adjuster marks, and patch so they are not rendered...

[jalview.git] / src / jalview / gui / AlignmentPanel.java

diff --git a/src/jalview/gui/AlignmentPanel.java b/src/jalview/gui/AlignmentPanel.java
index 27397e2..ce87c01 100644 (file)
--- a/src/jalview/gui/AlignmentPanel.java
+++ b/src/jalview/gui/AlignmentPanel.java
@@ -341,7 +341,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
       if (Jalview.isHeadlessMode())
       {
         AnnotationLabels aal = getAlabels();
-        int stringWidth = aal.drawLabels(null, false, idWidth, false, fm);
+        int stringWidth = aal.drawLabels(null, false, idWidth, false, false, fm);
         idWidth = Math.max(idWidth, stringWidth);
       }
       else
@@ -1064,7 +1064,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
     List<SequenceI> selection = av.getSelectionGroup() == null ? null
             : av.getSelectionGroup().getSequences(null);
     idCanvas.drawIds((Graphics2D) idGraphics, av, startSeq, endSeq - 1,
-            selection);
+            selection, false);
 
     idGraphics.setFont(av.getFont());
     idGraphics.translate(0, -scaleHeight);
@@ -1088,7 +1088,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
       int offset = getAlabels().getScrollOffset();
       idGraphics.translate(0, -offset);
       idGraphics.translate(0, alignmentDrawnHeight);
-      getAlabels().drawComponent(idGraphics, idWidth);
+      getAlabels().drawComponentNotGUI(idGraphics, idWidth);
       idGraphics.translate(0, -alignmentDrawnHeight);
 
       /*
@@ -1169,7 +1169,7 @@ public class AlignmentPanel extends GAlignmentPanel implements
      * draw sequence ids and annotation labels (if shown)
      */
     IdCanvas idCanvas = getIdPanel().getIdCanvas();
-    idCanvas.drawIdsWrapped((Graphics2D) g, av, 0, totalHeight);
+    idCanvas.drawIdsWrappedNoGUI((Graphics2D) g, av, 0, totalHeight);
 
     g.translate(idWidth, 0);