JAL-1713 update from Jalview 2.11.3 develop
[jalview.git] / src / jalview / gui / AnnotationColourChooser.java
index ad013f5..a0ab709 100644 (file)
  */
 package jalview.gui;
 
-import jalview.bin.Cache;
-import jalview.datamodel.AlignmentAnnotation;
-import jalview.datamodel.GraphLine;
-import jalview.datamodel.SequenceGroup;
-import jalview.gui.JalviewColourChooser.ColourChooserListener;
-import jalview.schemes.AnnotationColourGradient;
-import jalview.schemes.ColourSchemeI;
-import jalview.util.MessageManager;
-
 import java.awt.BorderLayout;
 import java.awt.Color;
 import java.awt.Dimension;
@@ -48,6 +39,14 @@ import javax.swing.JInternalFrame;
 import javax.swing.JLayeredPane;
 import javax.swing.JPanel;
 
+import jalview.bin.Cache;
+import jalview.datamodel.AlignmentAnnotation;
+import jalview.datamodel.GraphLine;
+import jalview.datamodel.SequenceGroup;
+import jalview.gui.JalviewColourChooser.ColourChooserListener;
+import jalview.schemes.AnnotationColourGradient;
+import jalview.schemes.ColourSchemeI;
+import jalview.util.MessageManager;
 import net.miginfocom.swing.MigLayout;
 
 @SuppressWarnings("serial")
@@ -87,6 +86,7 @@ public class AnnotationColourChooser extends AnnotationRowFilter
       }
     }
     frame = new JInternalFrame();
+    frame.setFrameIcon(null);
     frame.setContentPane(this);
     frame.setLayer(JLayeredPane.PALETTE_LAYER);
     Desktop.addInternalFrame(frame,
@@ -145,8 +145,7 @@ public class AnnotationColourChooser extends AnnotationRowFilter
                 "error.implementation_error_dont_know_about_threshold_setting"));
       }
       thresholdIsMin.setSelected(acg.isThresholdIsMinMax());
-      thresholdValue
-              .setText(String.valueOf(acg.getAnnotationThreshold()));
+      thresholdValue.setText(String.valueOf(acg.getAnnotationThreshold()));
     }
 
     jbInit();
@@ -437,8 +436,7 @@ public class AnnotationColourChooser extends AnnotationRowFilter
         {
           continue;
         }
-        sg.setColourScheme(
-                acg.getInstance(av, sg));
+        sg.setColourScheme(acg.getInstance(av, sg));
       }
     }
   }