JAL-1114 - refactor methods handling Vectors and Hashtables to Lists and Maps, and...

[jalview.git] / src / jalview / gui / AnnotationExporter.java

diff --git a/src/jalview/gui/AnnotationExporter.java b/src/jalview/gui/AnnotationExporter.java
index ffc5c1c..9c6231a 100755 (executable)
--- a/src/jalview/gui/AnnotationExporter.java
+++ b/src/jalview/gui/AnnotationExporter.java
@@ -18,6 +18,7 @@
 package jalview.gui;\r
 \r
 import java.util.*;\r
+import java.util.List;\r
 \r
 import java.awt.*;\r
 import java.awt.event.*;\r
@@ -44,7 +45,7 @@ public class AnnotationExporter extends JPanel
 \r
   AlignmentAnnotation[] annotations;\r
 \r
-  Vector sequenceGroups;\r
+  List<SequenceGroup> sequenceGroups;\r
 \r
   Hashtable alignmentProperties;\r
 \r
@@ -73,7 +74,7 @@ public class AnnotationExporter extends JPanel
   }\r
 \r
   public void exportAnnotations(AlignmentPanel ap,\r
-          AlignmentAnnotation[] annotations, Vector sequenceGroups,\r
+          AlignmentAnnotation[] annotations, List<SequenceGroup> list,\r
           Hashtable alProperties)\r
   {\r
     this.ap = ap;\r
@@ -81,7 +82,7 @@ public class AnnotationExporter extends JPanel
     GFFFormat.setVisible(false);\r
     CSVFormat.setVisible(true);\r
     this.annotations = annotations;\r
-    this.sequenceGroups = sequenceGroups;\r
+    this.sequenceGroups = list;\r
     this.alignmentProperties = alProperties;\r
     frame.setTitle("Export Annotations");\r
   }\r