JAL-674 make temperature factor, local secondary structure and service based secondar...

[jalview.git] / src / jalview / gui / Preferences.java

diff --git a/src/jalview/gui/Preferences.java b/src/jalview/gui/Preferences.java
index ab4f94f..09f3686 100755 (executable)
--- a/src/jalview/gui/Preferences.java
+++ b/src/jalview/gui/Preferences.java
@@ -590,9 +590,8 @@ public class Preferences extends GPreferences
 
     dasSource.saveProperties(Cache.applicationProperties);
     wsPrefs.updateAndRefreshWsMenuConfig(false);
-
     Cache.saveProperties();
-
+    Desktop.instance.doConfigureStructurePrefs();
     try
     {
       frame.setClosed(true);