JAL-4134 store/restore Newick tree for PAE annotation row

[jalview.git] / src / jalview / gui / TreeCanvas.java

diff --git a/src/jalview/gui/TreeCanvas.java b/src/jalview/gui/TreeCanvas.java
index 354feac..97ca391 100755 (executable)
--- a/src/jalview/gui/TreeCanvas.java
+++ b/src/jalview/gui/TreeCanvas.java
@@ -295,7 +295,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
 
       // Colour selected leaves differently
       boolean isSelected = false;
-      if (tp.getColumnWise())
+      if (tp.isColumnWise())
       {
         isSelected = isColumnForNodeSelected(node);
       }
@@ -822,7 +822,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
     else
     {
       Vector<BinaryNode> leaves = tree.findLeaves(highlightNode);
-      if (tp.getColumnWise()) {
+      if (tp.isColumnWise()) {
         markColumnsFor(getAssociatedPanels(), leaves, Color.red);
       } else {
       for (int i = 0; i < leaves.size(); i++)
@@ -1000,7 +1000,7 @@ public class TreeCanvas extends JPanel implements MouseListener, Runnable,
       setColor(groups.get(i), col.brighter());
 
       Vector<BinaryNode> l = tree.findLeaves(groups.get(i));
-      if (!tp.getColumnWise()) {
+      if (!tp.isColumnWise()) {
         createSeqGroupFor(aps, l, col);
       } else {
         markColumnsFor(aps,l,col);