import java.awt.Dimension;
import java.awt.EventQueue;
import java.awt.HeadlessException;
+import java.awt.event.ActionEvent;
+import java.awt.event.ActionListener;
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
import java.io.File;
import java.util.StringTokenizer;
import java.util.Vector;
+import javax.swing.BoxLayout;
import javax.swing.DefaultListCellRenderer;
+import javax.swing.JCheckBox;
import javax.swing.JFileChooser;
import javax.swing.JList;
import javax.swing.JPanel;
public class JalviewFileChooser extends JFileChooser
{
/**
+ * backupfilesCheckBox = "Include backup files" checkbox includeBackupfiles =
+ * flag set by checkbox
+ */
+ private JCheckBox backupfilesCheckBox = null;
+
+ protected boolean includeBackupFiles = false;
+
+ /**
* Factory method to return a file chooser that offers readable alignment file
* formats
*
* @param selected
* @return
*/
- public static JalviewFileChooser forRead(String directory, String selected)
+ public static JalviewFileChooser forRead(String directory,
+ String selected)
{
- List<String> extensions = new ArrayList<String>();
- List<String> descs = new ArrayList<String>();
+ List<String> extensions = new ArrayList<>();
+ List<String> descs = new ArrayList<>();
for (FileFormatI format : FileFormats.getInstance().getFormats())
{
if (format.isReadable())
{
// TODO in Java 8, forRead and forWrite can be a single method
// with a lambda expression parameter for isReadable/isWritable
- List<String> extensions = new ArrayList<String>();
- List<String> descs = new ArrayList<String>();
+ List<String> extensions = new ArrayList<>();
+ List<String> descs = new ArrayList<>();
for (FileFormatI format : FileFormats.getInstance().getFormats())
{
if (format.isWritable())
public JalviewFileChooser(String extension, String desc)
{
this(Cache.getProperty("LAST_DIRECTORY"), new String[] { extension },
- new String[] { desc }, desc, true);
+ new String[]
+ { desc }, desc, true);
}
JalviewFileChooser(String dir, String[] extensions, String[] descs,
String selected, boolean allFiles)
{
+ this(dir, extensions, descs, selected, allFiles, false);
+ }
+
+ public JalviewFileChooser(String dir, String[] extensions, String[] descs,
+ String selected, boolean allFiles, boolean allowBackupFiles)
+ {
super(safePath(dir));
if (extensions.length == descs.length)
{
- List<String[]> formats = new ArrayList<String[]>();
+ List<String[]> formats = new ArrayList<>();
for (int i = 0; i < extensions.length; i++)
{
formats.add(new String[] { extensions[i], descs[i] });
}
- init(formats, selected, allFiles);
+ init(formats, selected, allFiles, allowBackupFiles);
}
else
{
*/
void init(List<String[]> formats, String selected, boolean allFiles)
{
+ init(formats, selected, allFiles, false);
+ }
+
+ void init(List<String[]> formats, String selected, boolean allFiles,
+ boolean allowBackupFiles)
+ {
JalviewFileFilter chosen = null;
for (String[] format : formats)
{
JalviewFileFilter jvf = new JalviewFileFilter(format[0], format[1]);
+ if (allowBackupFiles)
+ {
+ jvf.setParentJFC(this);
+ }
addChoosableFileFilter(jvf);
if ((selected != null) && selected.equalsIgnoreCase(format[1]))
{
setFileFilter(chosen);
}
- setAccessory(new RecentlyOpened());
+ if (allowBackupFiles)
+ {
+ JPanel multi = new JPanel();
+ multi.setLayout(new BoxLayout(multi, BoxLayout.PAGE_AXIS));
+ if (backupfilesCheckBox == null)
+ {
+ try {
+ includeBackupFiles = Boolean.parseBoolean(
+ Cache.getProperty(BackupFiles.NS + "_FC_INCLUDE"));
+ } catch (Exception e)
+ {
+ includeBackupFiles = false;
+ }
+ backupfilesCheckBox = new JCheckBox(
+ MessageManager.getString("label.include_backup_files"),
+ includeBackupFiles);
+ backupfilesCheckBox.setAlignmentX(Component.CENTER_ALIGNMENT);
+ JalviewFileChooser jfc = this;
+ backupfilesCheckBox.addActionListener(new ActionListener()
+ {
+ @Override
+ public void actionPerformed(ActionEvent e)
+ {
+ includeBackupFiles = backupfilesCheckBox.isSelected();
+ Cache.setProperty(BackupFiles.NS + "_FC_INCLUDE",
+ String.valueOf(includeBackupFiles));
+ jfc.rescanCurrentDirectory();
+ jfc.revalidate();
+ jfc.repaint();
+ // This is a kludge. Cannot find out how to get the file list to
+ // refresh!
+ /*
+ Object o = jfc.getClientProperty(
+ CHOOSABLE_FILE_FILTER_CHANGED_PROPERTY);
+ jfc.firePropertyChange(CHOOSABLE_FILE_FILTER_CHANGED_PROPERTY,
+ o, o);
+ */
+ }
+ });
+ }
+ multi.add(new RecentlyOpened());
+ multi.add(backupfilesCheckBox);
+ setAccessory(multi);
+ }
+ else
+ {
+ // set includeBackupFiles=false to avoid other file choosers from picking
+ // up backup files (Just In Case)
+ includeBackupFiles = false;
+ setAccessory(new RecentlyOpened());
+ }
}
@Override
return null;
}
+ File ourselectedFile = null;
+
+ @Override
+ public File getSelectedFile()
+ {
+ File selfile = super.getSelectedFile();
+ if (selfile == null && ourselectedFile != null)
+ {
+ return ourselectedFile;
+ }
+ return selfile;
+ }
+
@Override
public int showSaveDialog(Component parent) throws HeadlessException
{
setDialogType(SAVE_DIALOG);
+ this.setSelectedFile(null);
int ret = showDialog(parent, MessageManager.getString("action.save"));
+ ourselectedFile = getSelectedFile();
+ if (getSelectedFile() == null)
+ {
+ // Workaround for Java 9,10 on OSX - no selected file, but there is a
+ // filename typed in
+ try
+ {
+ String filename = ((BasicFileChooserUI) getUI()).getFileName();
+ if (filename != null && filename.length() > 0)
+ {
+ ourselectedFile = new File(getCurrentDirectory(), filename);
+ }
+ } catch (Throwable x)
+ {
+ System.err.println(
+ "Unexpected exception when trying to get filename.");
+ x.printStackTrace();
+ }
+ }
+ if (ourselectedFile == null)
+ {
+ return JalviewFileChooser.CANCEL_OPTION;
+ }
if (getFileFilter() instanceof JalviewFileFilter)
{
JalviewFileFilter jvf = (JalviewFileFilter) getFileFilter();
- if (!jvf.accept(getSelectedFile()))
+ if (!jvf.accept(ourselectedFile))
{
- String withExtension = getSelectedFile() + "."
+ String withExtension = getSelectedFile().getName() + "."
+ jvf.getAcceptableExtension();
- setSelectedFile(new File(withExtension));
+ ourselectedFile = (new File(getCurrentDirectory(), withExtension));
+ setSelectedFile(ourselectedFile);
}
}
+
// TODO: ENSURE THAT FILES SAVED WITH A ':' IN THE NAME ARE REFUSED AND THE
- // USER PROMPTED FOR A NEW FILENAME
+ // USER PROMPTED FOR A NEW FILENAME.
+ // DO NOT need to confirm file overwrite if using backup files (the files
+ // aren't being overwritten!)
if ((ret == JalviewFileChooser.APPROVE_OPTION)
- && getSelectedFile().exists())
+ && ourselectedFile.exists() && (!BackupFiles.getEnabled()))
{
int confirm = JvOptionPane.showConfirmDialog(parent,
MessageManager.getString("label.overwrite_existing_file"),
{
ret = JalviewFileChooser.CANCEL_OPTION;
}
+
}
return ret;
}
});
- this.setBorder(new javax.swing.border.TitledBorder(MessageManager
- .getString("label.recently_opened")));
+ this.setBorder(new javax.swing.border.TitledBorder(
+ MessageManager.getString("label.recently_opened")));
final JScrollPane scroller = new JScrollPane(list);
@Override
public void run()
{
- scroller.getHorizontalScrollBar().setValue(
- scroller.getHorizontalScrollBar().getMaximum());
+ scroller.getHorizontalScrollBar()
+ .setValue(scroller.getHorizontalScrollBar().getMaximum());
}
});