JAL-3210 Improvements to eclipse detection. New src tree and SwingJS updated from...

[jalview.git] / src / jalview / io / vamsas / Rangetype.java

diff --git a/src/jalview/io/vamsas/Rangetype.java b/src/jalview/io/vamsas/Rangetype.java
index b4580f0..ee4fa83 100644 (file)
--- a/src/jalview/io/vamsas/Rangetype.java
+++ b/src/jalview/io/vamsas/Rangetype.java
@@ -148,7 +148,7 @@ public abstract class Rangetype extends DatastoreItem
           int se_end = se[1 - se[2]] + (se[2] == 0 ? 1 : -1);
           for (int p = se[se[2]]; p != se_end; p += se[2] == 0 ? 1 : -1)
           {
-            posList.add(Integer.valueOf(p));
+            posList.add(new Integer(p));
           }
         }
       }
@@ -159,7 +159,7 @@ public abstract class Rangetype extends DatastoreItem
         for (int p = 0, pSize = dseta.getPosCount(); p < pSize; p++)
         {
           pos = dseta.getPos(p).getI();
-          posList.add(Integer.valueOf(pos));
+          posList.add(new Integer(pos));
         }
       }
     }
@@ -193,8 +193,8 @@ public abstract class Rangetype extends DatastoreItem
         for (int s = 0, sSize = range.getSegCount(); s < sSize; s++)
         {
           se = getSegRange(range.getSeg(s), false);
-          posList.addElement(Integer.valueOf(se[0]));
-          posList.addElement(Integer.valueOf(se[1]));
+          posList.addElement(new Integer(se[0]));
+          posList.addElement(new Integer(se[1]));
         }
       }
       else if (range.getPosCount() > 0)
@@ -204,8 +204,8 @@ public abstract class Rangetype extends DatastoreItem
         for (int p = 0, pSize = range.getPosCount(); p < pSize; p++)
         {
           pos = range.getPos(p).getI();
-          posList.add(Integer.valueOf(pos));
-          posList.add(Integer.valueOf(pos));
+          posList.add(new Integer(pos));
+          posList.add(new Integer(pos));
         }
       }
     }