package jalview.jbgui;
+import jalview.datamodel.SequenceI;
import jalview.gui.AlignmentPanel;
import jalview.gui.Desktop;
import jalview.util.MessageManager;
-import jalview.ws.uimodel.PDBRestResponse.PDBResponseSummary;
import java.awt.BorderLayout;
import java.awt.CardLayout;
import javax.swing.JFrame;
import javax.swing.JInternalFrame;
import javax.swing.JLabel;
-import javax.swing.JList;
import javax.swing.JPanel;
import javax.swing.JScrollPane;
import javax.swing.JTable;
import javax.swing.JTextField;
-import javax.swing.ListSelectionModel;
+import javax.swing.event.DocumentEvent;
+import javax.swing.event.DocumentListener;
@SuppressWarnings("serial")
/**
protected JComboBox<FilterOption> cmb_filterOption = new JComboBox<FilterOption>();
+
protected AlignmentPanel ap;
protected JLabel lbl_result = new JLabel(
- MessageManager.getString("label.select") /* "Select : " */);
+ MessageManager.getString("label.select"));
- protected JButton btn_ok = new JButton();
+ protected JButton btn_view = new JButton();
protected JButton btn_cancel = new JButton();
protected JButton btn_pdbFromFile = new JButton();
- protected JTextField txt_search = new JTextField(18);
+ protected JTextField txt_search = new JTextField(14);
private JPanel pnl_actions = new JPanel();
private JPanel pnl_filter = new JPanel();
- private JPanel pnl_idInput = new JPanel();
+ private JPanel pnl_idInput = new JPanel(new FlowLayout());
+
+ private JPanel pnl_fileChooser = new JPanel(new FlowLayout());
+
+ private JPanel pnl_idInputBL = new JPanel(new BorderLayout());
- private JPanel pnl_fileChooser = new JPanel();
+ private JPanel pnl_fileChooserBL = new JPanel(new BorderLayout());
protected JPanel pnl_switchableViews = new JPanel(new CardLayout());
protected ImageIcon loadingImage = new ImageIcon(getClass().getResource(
"/images/loading.gif"));
+ protected ImageIcon goodImage = new ImageIcon(getClass().getResource(
+ "/images/good.png"));
+
+ protected ImageIcon errorImage = new ImageIcon(getClass().getResource(
+ "/images/error.png"));
+
protected JLabel lbl_loading = new JLabel(loadingImage);
+ protected JLabel lbl_pdbManualFetchStatus = new JLabel(errorImage);
+
+ protected JLabel lbl_fromFileStatus = new JLabel(errorImage);
+
+ protected AssciateSeqPanel idInputAssSeqPanel = new AssciateSeqPanel();
+
+ protected AssciateSeqPanel fileChooserAssSeqPanel = new AssciateSeqPanel();
+
protected static final String VIEWS_FILTER = "VIEWS_FILTER";
protected static final String VIEWS_FROM_FILE = "VIEWS_FROM_FILE";
protected static final String VIEWS_ENTER_ID = "VIEWS_ENTER_ID";
- protected JList<PDBResponseSummary> jList_FoundStructures = new JList<PDBResponseSummary>();
+ // protected JList<PDBResponseSummary> jList_FoundStructures = new
+ // JList<PDBResponseSummary>();
protected JTable tbl_summary = new JTable();
*/
private void jbInit() throws Exception
{
- btn_ok.setFont(new java.awt.Font("Verdana", 0, 12));
- btn_ok.setText(MessageManager.getString("action.view"));
- btn_ok.addActionListener(new java.awt.event.ActionListener()
+ btn_view.setFont(new java.awt.Font("Verdana", 0, 12));
+ btn_view.setText(MessageManager.getString("action.view"));
+ btn_view.addActionListener(new java.awt.event.ActionListener()
{
public void actionPerformed(ActionEvent e)
{
btn_pdbFromFile.setFont(new java.awt.Font("Verdana", 0, 12));
String btn_title = MessageManager.getString("label.select_pdb_file");
- btn_pdbFromFile.setText(" " + btn_title + " ");
+ btn_pdbFromFile.setText(btn_title + " ");
btn_pdbFromFile.addActionListener(new java.awt.event.ActionListener()
{
public void actionPerformed(ActionEvent e)
}
});
- jList_FoundStructures
- .setSelectionMode(ListSelectionModel.MULTIPLE_INTERVAL_SELECTION);
- jList_FoundStructures.setLayoutOrientation(JList.VERTICAL);
- jList_FoundStructures.setVisibleRowCount(-1);
scrl_foundStructures.setPreferredSize(new Dimension(500, 300));
scrl_foundStructures
.setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_NEVER);
chk_invertFilter.addItemListener(this);
pnl_actions.add(chk_rememberSettings);
- pnl_actions.add(btn_ok);
+ pnl_actions.add(btn_view);
pnl_actions.add(btn_cancel);
- pnl_filter.add(lbl_result);
+ // pnl_filter.add(lbl_result);
pnl_filter.add(cmb_filterOption);
+ pnl_filter.add(lbl_loading);
+ pnl_filter.add(chk_invertFilter);
lbl_loading.setVisible(false);
- pnl_filter.add(lbl_loading);
+ txt_search.setToolTipText(MessageManager
+ .getString("label.enter_pdb_id"));
+ cmb_filterOption.setToolTipText(MessageManager
+ .getString("info.select_filter_option"));
+ txt_search.getDocument().addDocumentListener(new DocumentListener()
+ {
+ @Override
+ public void insertUpdate(DocumentEvent e)
+ {
+ txt_search_ActionPerformed();
+ }
- pnl_filter.add(chk_invertFilter);
+ @Override
+ public void removeUpdate(DocumentEvent e)
+ {
+ txt_search_ActionPerformed();
+ }
- pnl_idInput.setLayout(new FlowLayout());
+ @Override
+ public void changedUpdate(DocumentEvent e)
+ {
+ txt_search_ActionPerformed();
+ }
+ });
pnl_idInput.add(txt_search);
+ pnl_idInput.add(lbl_pdbManualFetchStatus);
- pnl_fileChooser.setLayout(new FlowLayout());
pnl_fileChooser.add(btn_pdbFromFile);
+ pnl_fileChooser.add(lbl_fromFileStatus);
+
+ pnl_fileChooserBL.add(fileChooserAssSeqPanel, BorderLayout.NORTH);
+ pnl_fileChooserBL.add(pnl_fileChooser, BorderLayout.CENTER);
+
+ pnl_idInputBL.add(idInputAssSeqPanel, BorderLayout.NORTH);
+ pnl_idInputBL.add(pnl_idInput, BorderLayout.CENTER);
- pnl_switchableViews.add(pnl_fileChooser, VIEWS_FROM_FILE);
- pnl_switchableViews.add(pnl_idInput, VIEWS_ENTER_ID);
+ pnl_switchableViews.add(pnl_fileChooserBL, VIEWS_FROM_FILE);
+ pnl_switchableViews.add(pnl_idInputBL, VIEWS_ENTER_ID);
pnl_switchableViews.add(scrl_foundStructures, VIEWS_FILTER);
this.setLayout(mainLayout);
}
}
+ /**
+ * This inner class provides the provides the data model for associate
+ * sequence combo-box - cmb_assSeq
+ *
+ * @author tcnofoegbu
+ *
+ */
+ public class AssociateSeqOptions
+ {
+ private SequenceI sequence;
+ private String name;
+
+ public AssociateSeqOptions(SequenceI seq)
+ {
+ this.sequence = seq;
+ this.name = (seq.getName().length() >= 23) ? seq.getName().substring(
+ 0, 23) : seq.getName();
+ }
+
+ public AssociateSeqOptions(String name, SequenceI seq)
+ {
+ this.name = name;
+ this.sequence = seq;
+ }
+
+ public String toString()
+ {
+ return name;
+ }
+
+ public String getName()
+ {
+ return name;
+ }
+
+ public void setName(String name)
+ {
+ this.name = name;
+ }
+
+ public SequenceI getSequence()
+ {
+ return sequence;
+ }
+
+ public void setSequence(SequenceI sequence)
+ {
+ this.sequence = sequence;
+ }
+
+ }
+
+ /**
+ * This inner class holds the Layout and configuration of the panel which
+ * handles association of manually fetched structures to a unique sequence
+ * when more than one sequence selection is made
+ *
+ * @author tcnofoegbu
+ *
+ */
+ public class AssciateSeqPanel extends JPanel implements ItemListener
+ {
+ private JComboBox<AssociateSeqOptions> cmb_assSeq = new JComboBox<AssociateSeqOptions>();
+ public AssciateSeqPanel()
+ {
+ this.setLayout(new FlowLayout());
+ this.add(cmb_assSeq);
+ cmb_assSeq.setToolTipText(MessageManager
+ .getString("info.associate_wit_sequence"));
+ cmb_assSeq.addItemListener(this);
+ }
+
+ public void loadCmbAssSeq()
+ {
+ populateCmbAssociateSeqOptions(cmb_assSeq);
+ }
+
+ public JComboBox<AssociateSeqOptions> getCmb_assSeq()
+ {
+ return cmb_assSeq;
+ }
+
+ public void setCmb_assSeq(JComboBox<AssociateSeqOptions> cmb_assSeq)
+ {
+ this.cmb_assSeq = cmb_assSeq;
+ }
+
+ @Override
+ public void itemStateChanged(ItemEvent e)
+ {
+ if (e.getStateChange() == ItemEvent.SELECTED)
+ {
+ cmbAssSeqStateChanged();
+ }
+ }
+ }
+
public JComboBox<FilterOption> getCmbFilterOption()
{
return cmb_filterOption;
protected abstract void updateCurrentView();
- protected abstract void ok_ActionPerformed();
-
protected abstract void populateFilterComboBox();
+ protected abstract void ok_ActionPerformed();
+
protected abstract void pdbFromFile_actionPerformed();
+
+ protected abstract void txt_search_ActionPerformed();
+
+ public abstract void populateCmbAssociateSeqOptions(
+ JComboBox<AssociateSeqOptions> cmb_assSeq);
+
+ public abstract void cmbAssSeqStateChanged();
}
git://source.jalview.org / jalview.git / blobdiff