tidied up system.out messages and moved many to stderr.

[jalview.git] / src / jalview / math / Matrix.java

diff --git a/src/jalview/math/Matrix.java b/src/jalview/math/Matrix.java
index d08fe22..0f45978 100755 (executable)
--- a/src/jalview/math/Matrix.java
+++ b/src/jalview/math/Matrix.java
@@ -224,8 +224,8 @@ public class Matrix {
         if (m != l) {\r
           iter++;\r
           if (iter == 30) {\r
-            System.out.print("Too many iterations in tqli");\r
-            System.exit(0);\r
+            System.err.print("Too many iterations in tqli");\r
+            System.exit(0); // JBPNote - should this really be here ???\r
           } else {\r
             //     System.out.println("Iteration " + iter);\r
           }\r
@@ -395,8 +395,8 @@ public class Matrix {
         if (m != l) {\r
           iter++;\r
           if (iter == 30) {\r
-            System.out.print("Too many iterations in tqli");\r
-            System.exit(0);\r
+            System.err.print("Too many iterations in tqli");\r
+            System.exit(0); // JBPNote - same as above - not a graceful exit!\r
           } else {\r
             //     System.out.println("Iteration " + iter);\r
           }\r