This commit was manufactured by cvs2svn to create branch 'VamJalview'.

[jalview.git] / src / jalview / schemabinding / version2 / AlignmentDescriptor.java

diff --git a/src/jalview/schemabinding/version2/AlignmentDescriptor.java b/src/jalview/schemabinding/version2/AlignmentDescriptor.java
new file mode 100755 (executable)
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+++ b/src/jalview/schemabinding/version2/AlignmentDescriptor.java
@@ -0,0 +1,243 @@
+/*\r
+ * This class was automatically generated with \r
+ * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
+ * Schema.\r
+ * $Id$\r
+ */\r
+\r
+package jalview.schemabinding.version2;\r
+\r
+  //---------------------------------/\r
+ //- Imported classes and packages -/\r
+//---------------------------------/\r
+\r
+import org.exolab.castor.mapping.AccessMode;\r
+import org.exolab.castor.xml.TypeValidator;\r
+import org.exolab.castor.xml.XMLFieldDescriptor;\r
+import org.exolab.castor.xml.validators.*;\r
+\r
+/**\r
+ * Class AlignmentDescriptor.\r
+ * \r
+ * @version $Revision$ $Date$\r
+ */\r
+public class AlignmentDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {\r
+\r
+\r
+      //--------------------------/\r
+     //- Class/Member Variables -/\r
+    //--------------------------/\r
+\r
+    /**\r
+     * Field nsPrefix\r
+     */\r
+    private java.lang.String nsPrefix;\r
+\r
+    /**\r
+     * Field nsURI\r
+     */\r
+    private java.lang.String nsURI;\r
+\r
+    /**\r
+     * Field xmlName\r
+     */\r
+    private java.lang.String xmlName;\r
+\r
+    /**\r
+     * Field identity\r
+     */\r
+    private org.exolab.castor.xml.XMLFieldDescriptor identity;\r
+\r
+\r
+      //----------------/\r
+     //- Constructors -/\r
+    //----------------/\r
+\r
+    public AlignmentDescriptor() {\r
+        super();\r
+        nsURI = "www.vamsas.ac.uk/jalview/version2";\r
+        xmlName = "Alignment";\r
+        \r
+        //-- set grouping compositor\r
+        setCompositorAsSequence();\r
+        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;\r
+        org.exolab.castor.xml.XMLFieldHandler              handler        = null;\r
+        org.exolab.castor.xml.FieldValidator               fieldValidator = null;\r
+        //-- initialize attribute descriptors\r
+        \r
+        //-- initialize element descriptors\r
+        \r
+        //-- _annotation\r
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Annotation.class, "_annotation", "Annotation", org.exolab.castor.xml.NodeType.Element);\r
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
+            public java.lang.Object getValue( java.lang.Object object ) \r
+                throws IllegalStateException\r
+            {\r
+                Alignment target = (Alignment) object;\r
+                return target.getAnnotation();\r
+            }\r
+            public void setValue( java.lang.Object object, java.lang.Object value) \r
+                throws IllegalStateException, IllegalArgumentException\r
+            {\r
+                try {\r
+                    Alignment target = (Alignment) object;\r
+                    target.setAnnotation( (jalview.schemabinding.version2.Annotation) value);\r
+                }\r
+                catch (java.lang.Exception ex) {\r
+                    throw new IllegalStateException(ex.toString());\r
+                }\r
+            }\r
+            public java.lang.Object newInstance( java.lang.Object parent ) {\r
+                return new jalview.schemabinding.version2.Annotation();\r
+            }\r
+        } );\r
+        desc.setHandler(handler);\r
+        desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");\r
+        desc.setMultivalued(false);\r
+        addFieldDescriptor(desc);\r
+        \r
+        //-- validation code for: _annotation\r
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+        { //-- local scope\r
+        }\r
+        desc.setValidator(fieldValidator);\r
+        //-- _sequenceSet\r
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.SequenceSet.class, "_sequenceSet", "SequenceSet", org.exolab.castor.xml.NodeType.Element);\r
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {\r
+            public java.lang.Object getValue( java.lang.Object object ) \r
+                throws IllegalStateException\r
+            {\r
+                Alignment target = (Alignment) object;\r
+                return target.getSequenceSet();\r
+            }\r
+            public void setValue( java.lang.Object object, java.lang.Object value) \r
+                throws IllegalStateException, IllegalArgumentException\r
+            {\r
+                try {\r
+                    Alignment target = (Alignment) object;\r
+                    target.setSequenceSet( (jalview.schemabinding.version2.SequenceSet) value);\r
+                }\r
+                catch (java.lang.Exception ex) {\r
+                    throw new IllegalStateException(ex.toString());\r
+                }\r
+            }\r
+            public java.lang.Object newInstance( java.lang.Object parent ) {\r
+                return new jalview.schemabinding.version2.SequenceSet();\r
+            }\r
+        } );\r
+        desc.setHandler(handler);\r
+        desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");\r
+        desc.setRequired(true);\r
+        desc.setMultivalued(false);\r
+        addFieldDescriptor(desc);\r
+        \r
+        //-- validation code for: _sequenceSet\r
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();\r
+        fieldValidator.setMinOccurs(1);\r
+        { //-- local scope\r
+        }\r
+        desc.setValidator(fieldValidator);\r
+    } //-- jalview.schemabinding.version2.AlignmentDescriptor()\r
+\r
+\r
+      //-----------/\r
+     //- Methods -/\r
+    //-----------/\r
+\r
+    /**\r
+     * Method getAccessMode\r
+     * \r
+     * \r
+     * \r
+     * @return AccessMode\r
+     */\r
+    public org.exolab.castor.mapping.AccessMode getAccessMode()\r
+    {\r
+        return null;\r
+    } //-- org.exolab.castor.mapping.AccessMode getAccessMode() \r
+\r
+    /**\r
+     * Method getExtends\r
+     * \r
+     * \r
+     * \r
+     * @return ClassDescriptor\r
+     */\r
+    public org.exolab.castor.mapping.ClassDescriptor getExtends()\r
+    {\r
+        return null;\r
+    } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() \r
+\r
+    /**\r
+     * Method getIdentity\r
+     * \r
+     * \r
+     * \r
+     * @return FieldDescriptor\r
+     */\r
+    public org.exolab.castor.mapping.FieldDescriptor getIdentity()\r
+    {\r
+        return identity;\r
+    } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() \r
+\r
+    /**\r
+     * Method getJavaClass\r
+     * \r
+     * \r
+     * \r
+     * @return Class\r
+     */\r
+    public java.lang.Class getJavaClass()\r
+    {\r
+        return jalview.schemabinding.version2.Alignment.class;\r
+    } //-- java.lang.Class getJavaClass() \r
+\r
+    /**\r
+     * Method getNameSpacePrefix\r
+     * \r
+     * \r
+     * \r
+     * @return String\r
+     */\r
+    public java.lang.String getNameSpacePrefix()\r
+    {\r
+        return nsPrefix;\r
+    } //-- java.lang.String getNameSpacePrefix() \r
+\r
+    /**\r
+     * Method getNameSpaceURI\r
+     * \r
+     * \r
+     * \r
+     * @return String\r
+     */\r
+    public java.lang.String getNameSpaceURI()\r
+    {\r
+        return nsURI;\r
+    } //-- java.lang.String getNameSpaceURI() \r
+\r
+    /**\r
+     * Method getValidator\r
+     * \r
+     * \r
+     * \r
+     * @return TypeValidator\r
+     */\r
+    public org.exolab.castor.xml.TypeValidator getValidator()\r
+    {\r
+        return this;\r
+    } //-- org.exolab.castor.xml.TypeValidator getValidator() \r
+\r
+    /**\r
+     * Method getXMLName\r
+     * \r
+     * \r
+     * \r
+     * @return String\r
+     */\r
+    public java.lang.String getXMLName()\r
+    {\r
+        return xmlName;\r
+    } //-- java.lang.String getXMLName() \r
+\r
+}\r