/*\r
- * This class was automatically generated with \r
+ * This class was automatically generated with\r
* <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
* Schema.\r
* $Id$\r
\r
package jalview.schemabinding.version2;\r
\r
- //---------------------------------/\r
- //- Imported classes and packages -/\r
+//---------------------------------/\r
+//- Imported classes and packages -/\r
//---------------------------------/\r
\r
-import java.io.IOException;\r
-import java.io.Reader;\r
-import java.io.Serializable;\r
-import java.io.Writer;\r
-import org.exolab.castor.xml.MarshalException;\r
-import org.exolab.castor.xml.Marshaller;\r
-import org.exolab.castor.xml.Unmarshaller;\r
-import org.exolab.castor.xml.ValidationException;\r
-import org.xml.sax.ContentHandler;\r
+import org.exolab.castor.xml.*;\r
\r
/**\r
* Class AnnotationElement.\r
- * \r
+ *\r
* @version $Revision$ $Date$\r
*/\r
-public class AnnotationElement implements java.io.Serializable {\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _position\r
- */\r
- private int _position;\r
-\r
- /**\r
- * keeps track of state for field: _position\r
- */\r
- private boolean _has_position;\r
-\r
- /**\r
- * Field _colour\r
- */\r
- private int _colour;\r
-\r
- /**\r
- * keeps track of state for field: _colour\r
- */\r
- private boolean _has_colour;\r
-\r
- /**\r
- * Field _displayCharacter\r
- */\r
- private java.lang.String _displayCharacter;\r
-\r
- /**\r
- * Field _description\r
- */\r
- private java.lang.String _description;\r
-\r
- /**\r
- * Field _secondaryStructure\r
- */\r
- private java.lang.String _secondaryStructure;\r
-\r
- /**\r
- * Field _value\r
- */\r
- private float _value;\r
-\r
- /**\r
- * keeps track of state for field: _value\r
- */\r
- private boolean _has_value;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public AnnotationElement() {\r
- super();\r
- } //-- jalview.schemabinding.version2.AnnotationElement()\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * Method deleteColour\r
- * \r
- */\r
- public void deleteColour()\r
- {\r
- this._has_colour= false;\r
- } //-- void deleteColour() \r
-\r
- /**\r
- * Method deletePosition\r
- * \r
- */\r
- public void deletePosition()\r
- {\r
- this._has_position= false;\r
- } //-- void deletePosition() \r
-\r
- /**\r
- * Method deleteValue\r
- * \r
- */\r
- public void deleteValue()\r
- {\r
- this._has_value= false;\r
- } //-- void deleteValue() \r
-\r
- /**\r
- * Returns the value of field 'colour'.\r
- * \r
- * @return int\r
- * @return the value of field 'colour'.\r
- */\r
- public int getColour()\r
- {\r
- return this._colour;\r
- } //-- int getColour() \r
-\r
- /**\r
- * Returns the value of field 'description'.\r
- * \r
- * @return String\r
- * @return the value of field 'description'.\r
- */\r
- public java.lang.String getDescription()\r
- {\r
- return this._description;\r
- } //-- java.lang.String getDescription() \r
-\r
- /**\r
- * Returns the value of field 'displayCharacter'.\r
- * \r
- * @return String\r
- * @return the value of field 'displayCharacter'.\r
- */\r
- public java.lang.String getDisplayCharacter()\r
- {\r
- return this._displayCharacter;\r
- } //-- java.lang.String getDisplayCharacter() \r
-\r
- /**\r
- * Returns the value of field 'position'.\r
- * \r
- * @return int\r
- * @return the value of field 'position'.\r
- */\r
- public int getPosition()\r
- {\r
- return this._position;\r
- } //-- int getPosition() \r
-\r
- /**\r
- * Returns the value of field 'secondaryStructure'.\r
- * \r
- * @return String\r
- * @return the value of field 'secondaryStructure'.\r
- */\r
- public java.lang.String getSecondaryStructure()\r
- {\r
- return this._secondaryStructure;\r
- } //-- java.lang.String getSecondaryStructure() \r
-\r
- /**\r
- * Returns the value of field 'value'.\r
- * \r
- * @return float\r
- * @return the value of field 'value'.\r
- */\r
- public float getValue()\r
- {\r
- return this._value;\r
- } //-- float getValue() \r
-\r
- /**\r
- * Method hasColour\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasColour()\r
- {\r
- return this._has_colour;\r
- } //-- boolean hasColour() \r
-\r
- /**\r
- * Method hasPosition\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasPosition()\r
- {\r
- return this._has_position;\r
- } //-- boolean hasPosition() \r
-\r
- /**\r
- * Method hasValue\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean hasValue()\r
- {\r
- return this._has_value;\r
- } //-- boolean hasValue() \r
-\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Sets the value of field 'colour'.\r
- * \r
- * @param colour the value of field 'colour'.\r
- */\r
- public void setColour(int colour)\r
- {\r
- this._colour = colour;\r
- this._has_colour = true;\r
- } //-- void setColour(int) \r
-\r
- /**\r
- * Sets the value of field 'description'.\r
- * \r
- * @param description the value of field 'description'.\r
- */\r
- public void setDescription(java.lang.String description)\r
- {\r
- this._description = description;\r
- } //-- void setDescription(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'displayCharacter'.\r
- * \r
- * @param displayCharacter the value of field 'displayCharacter'\r
- */\r
- public void setDisplayCharacter(java.lang.String displayCharacter)\r
- {\r
- this._displayCharacter = displayCharacter;\r
- } //-- void setDisplayCharacter(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'position'.\r
- * \r
- * @param position the value of field 'position'.\r
- */\r
- public void setPosition(int position)\r
- {\r
- this._position = position;\r
- this._has_position = true;\r
- } //-- void setPosition(int) \r
-\r
- /**\r
- * Sets the value of field 'secondaryStructure'.\r
- * \r
- * @param secondaryStructure the value of field\r
- * 'secondaryStructure'.\r
- */\r
- public void setSecondaryStructure(java.lang.String secondaryStructure)\r
- {\r
- this._secondaryStructure = secondaryStructure;\r
- } //-- void setSecondaryStructure(java.lang.String) \r
-\r
- /**\r
- * Sets the value of field 'value'.\r
- * \r
- * @param value the value of field 'value'.\r
- */\r
- public void setValue(float value)\r
- {\r
- this._value = value;\r
- this._has_value = true;\r
- } //-- void setValue(float) \r
-\r
- /**\r
- * Method unmarshal\r
- * \r
- * \r
- * \r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+public class AnnotationElement\r
+ implements java.io.Serializable\r
+{\r
+\r
+ //--------------------------/\r
+ //- Class/Member Variables -/\r
+ //--------------------------/\r
+\r
+ /**\r
+ * Field _position\r
+ */\r
+ private int _position;\r
+\r
+ /**\r
+ * keeps track of state for field: _position\r
+ */\r
+ private boolean _has_position;\r
+\r
+ /**\r
+ * Field _colour\r
+ */\r
+ private int _colour;\r
+\r
+ /**\r
+ * keeps track of state for field: _colour\r
+ */\r
+ private boolean _has_colour;\r
+\r
+ /**\r
+ * Field _displayCharacter\r
+ */\r
+ private java.lang.String _displayCharacter;\r
+\r
+ /**\r
+ * Field _description\r
+ */\r
+ private java.lang.String _description;\r
+\r
+ /**\r
+ * Field _secondaryStructure\r
+ */\r
+ private java.lang.String _secondaryStructure;\r
+\r
+ /**\r
+ * Field _value\r
+ */\r
+ private float _value;\r
+\r
+ /**\r
+ * keeps track of state for field: _value\r
+ */\r
+ private boolean _has_value;\r
+\r
+ //----------------/\r
+ //- Constructors -/\r
+ //----------------/\r
+\r
+ public AnnotationElement()\r
+ {\r
+ super();\r
+ } //-- jalview.schemabinding.version2.AnnotationElement()\r
+\r
+ //-----------/\r
+ //- Methods -/\r
+ //-----------/\r
+\r
+ /**\r
+ * Method deleteColour\r
+ *\r
+ */\r
+ public void deleteColour()\r
+ {\r
+ this._has_colour = false;\r
+ } //-- void deleteColour()\r
+\r
+ /**\r
+ * Method deletePosition\r
+ *\r
+ */\r
+ public void deletePosition()\r
+ {\r
+ this._has_position = false;\r
+ } //-- void deletePosition()\r
+\r
+ /**\r
+ * Method deleteValue\r
+ *\r
+ */\r
+ public void deleteValue()\r
+ {\r
+ this._has_value = false;\r
+ } //-- void deleteValue()\r
+\r
+ /**\r
+ * Returns the value of field 'colour'.\r
+ *\r
+ * @return int\r
+ * @return the value of field 'colour'.\r
+ */\r
+ public int getColour()\r
+ {\r
+ return this._colour;\r
+ } //-- int getColour()\r
+\r
+ /**\r
+ * Returns the value of field 'description'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'description'.\r
+ */\r
+ public java.lang.String getDescription()\r
+ {\r
+ return this._description;\r
+ } //-- java.lang.String getDescription()\r
+\r
+ /**\r
+ * Returns the value of field 'displayCharacter'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'displayCharacter'.\r
+ */\r
+ public java.lang.String getDisplayCharacter()\r
+ {\r
+ return this._displayCharacter;\r
+ } //-- java.lang.String getDisplayCharacter()\r
+\r
+ /**\r
+ * Returns the value of field 'position'.\r
+ *\r
+ * @return int\r
+ * @return the value of field 'position'.\r
+ */\r
+ public int getPosition()\r
+ {\r
+ return this._position;\r
+ } //-- int getPosition()\r
+\r
+ /**\r
+ * Returns the value of field 'secondaryStructure'.\r
+ *\r
+ * @return String\r
+ * @return the value of field 'secondaryStructure'.\r
+ */\r
+ public java.lang.String getSecondaryStructure()\r
+ {\r
+ return this._secondaryStructure;\r
+ } //-- java.lang.String getSecondaryStructure()\r
+\r
+ /**\r
+ * Returns the value of field 'value'.\r
+ *\r
+ * @return float\r
+ * @return the value of field 'value'.\r
+ */\r
+ public float getValue()\r
+ {\r
+ return this._value;\r
+ } //-- float getValue()\r
+\r
+ /**\r
+ * Method hasColour\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasColour()\r
+ {\r
+ return this._has_colour;\r
+ } //-- boolean hasColour()\r
+\r
+ /**\r
+ * Method hasPosition\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasPosition()\r
+ {\r
+ return this._has_position;\r
+ } //-- boolean hasPosition()\r
+\r
+ /**\r
+ * Method hasValue\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean hasValue()\r
+ {\r
+ return this._has_value;\r
+ } //-- boolean hasValue()\r
+\r
+ /**\r
+ * Method isValid\r
+ *\r
+ *\r
+ *\r
+ * @return boolean\r
+ */\r
+ public boolean isValid()\r
+ {\r
+ try\r
{\r
- return (jalview.schemabinding.version2.AnnotationElement) Unmarshaller.unmarshal(jalview.schemabinding.version2.AnnotationElement.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
-\r
- /**\r
- * Method validate\r
- * \r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
+ validate();\r
+ }\r
+ catch (org.exolab.castor.xml.ValidationException vex)\r
{\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- } //-- void validate() \r
+ return false;\r
+ }\r
+ return true;\r
+ } //-- boolean isValid()\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param out\r
+ */\r
+ public void marshal(java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, out);\r
+ } //-- void marshal(java.io.Writer)\r
+\r
+ /**\r
+ * Method marshal\r
+ *\r
+ *\r
+ *\r
+ * @param handler\r
+ */\r
+ public void marshal(org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException, org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+\r
+ Marshaller.marshal(this, handler);\r
+ } //-- void marshal(org.xml.sax.ContentHandler)\r
+\r
+ /**\r
+ * Sets the value of field 'colour'.\r
+ *\r
+ * @param colour the value of field 'colour'.\r
+ */\r
+ public void setColour(int colour)\r
+ {\r
+ this._colour = colour;\r
+ this._has_colour = true;\r
+ } //-- void setColour(int)\r
+\r
+ /**\r
+ * Sets the value of field 'description'.\r
+ *\r
+ * @param description the value of field 'description'.\r
+ */\r
+ public void setDescription(java.lang.String description)\r
+ {\r
+ this._description = description;\r
+ } //-- void setDescription(java.lang.String)\r
+\r
+ /**\r
+ * Sets the value of field 'displayCharacter'.\r
+ *\r
+ * @param displayCharacter the value of field 'displayCharacter'\r
+ */\r
+ public void setDisplayCharacter(java.lang.String displayCharacter)\r
+ {\r
+ this._displayCharacter = displayCharacter;\r
+ } //-- void setDisplayCharacter(java.lang.String)\r
+\r
+ /**\r
+ * Sets the value of field 'position'.\r
+ *\r
+ * @param position the value of field 'position'.\r
+ */\r
+ public void setPosition(int position)\r
+ {\r
+ this._position = position;\r
+ this._has_position = true;\r
+ } //-- void setPosition(int)\r
+\r
+ /**\r
+ * Sets the value of field 'secondaryStructure'.\r
+ *\r
+ * @param secondaryStructure the value of field\r
+ * 'secondaryStructure'.\r
+ */\r
+ public void setSecondaryStructure(java.lang.String secondaryStructure)\r
+ {\r
+ this._secondaryStructure = secondaryStructure;\r
+ } //-- void setSecondaryStructure(java.lang.String)\r
+\r
+ /**\r
+ * Sets the value of field 'value'.\r
+ *\r
+ * @param value the value of field 'value'.\r
+ */\r
+ public void setValue(float value)\r
+ {\r
+ this._value = value;\r
+ this._has_value = true;\r
+ } //-- void setValue(float)\r
+\r
+ /**\r
+ * Method unmarshal\r
+ *\r
+ *\r
+ *\r
+ * @param reader\r
+ * @return Object\r
+ */\r
+ public static java.lang.Object unmarshal(java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ return (jalview.schemabinding.version2.AnnotationElement) Unmarshaller.\r
+ unmarshal(jalview.schemabinding.version2.AnnotationElement.class,\r
+ reader);\r
+ } //-- java.lang.Object unmarshal(java.io.Reader)\r
+\r
+ /**\r
+ * Method validate\r
+ *\r
+ */\r
+ public void validate()\r
+ throws org.exolab.castor.xml.ValidationException\r
+ {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.\r
+ Validator();\r
+ validator.validate(this);\r
+ } //-- void validate()\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff