/*\r
- * This class was automatically generated with \r
- * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML\r
- * Schema.\r
- * $Id$\r
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)\r
+ * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+ * \r
+ * This program is free software; you can redistribute it and/or\r
+ * modify it under the terms of the GNU General Public License\r
+ * as published by the Free Software Foundation; either version 2\r
+ * of the License, or (at your option) any later version.\r
+ * \r
+ * This program is distributed in the hope that it will be useful,\r
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the\r
+ * GNU General Public License for more details.\r
+ * \r
+ * You should have received a copy of the GNU General Public License\r
+ * along with this program; if not, write to the Free Software\r
+ * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA\r
*/\r
-\r
package jalview.schemabinding.version2;\r
\r
- //---------------------------------/\r
- //- Imported classes and packages -/\r
-//---------------------------------/\r
-\r
-import java.io.IOException;\r
-import java.io.Reader;\r
-import java.io.Serializable;\r
-import java.io.Writer;\r
-import java.util.Enumeration;\r
-import java.util.Vector;\r
-import org.exolab.castor.xml.MarshalException;\r
+// ---------------------------------/\r
+// - Imported classes and packages -/\r
+// ---------------------------------/\r
+\r
import org.exolab.castor.xml.Marshaller;\r
import org.exolab.castor.xml.Unmarshaller;\r
-import org.exolab.castor.xml.ValidationException;\r
-import org.xml.sax.ContentHandler;\r
\r
/**\r
* Class FeatureSettings.\r
* \r
* @version $Revision$ $Date$\r
*/\r
-public class FeatureSettings implements java.io.Serializable {\r
-\r
-\r
- //--------------------------/\r
- //- Class/Member Variables -/\r
- //--------------------------/\r
-\r
- /**\r
- * Field _settingList\r
- */\r
- private java.util.Vector _settingList;\r
-\r
- /**\r
- * Field _groupList\r
- */\r
- private java.util.Vector _groupList;\r
-\r
-\r
- //----------------/\r
- //- Constructors -/\r
- //----------------/\r
-\r
- public FeatureSettings() {\r
- super();\r
- _settingList = new Vector();\r
- _groupList = new Vector();\r
- } //-- jalview.schemabinding.version2.FeatureSettings()\r
-\r
-\r
- //-----------/\r
- //- Methods -/\r
- //-----------/\r
-\r
- /**\r
- * Method addGroup\r
- * \r
- * \r
- * \r
- * @param vGroup\r
- */\r
- public void addGroup(jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _groupList.addElement(vGroup);\r
- } //-- void addGroup(jalview.schemabinding.version2.Group) \r
-\r
- /**\r
- * Method addGroup\r
- * \r
- * \r
- * \r
- * @param index\r
- * @param vGroup\r
- */\r
- public void addGroup(int index, jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _groupList.insertElementAt(vGroup, index);\r
- } //-- void addGroup(int, jalview.schemabinding.version2.Group) \r
-\r
- /**\r
- * Method addSetting\r
- * \r
- * \r
- * \r
- * @param vSetting\r
- */\r
- public void addSetting(jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _settingList.addElement(vSetting);\r
- } //-- void addSetting(jalview.schemabinding.version2.Setting) \r
-\r
- /**\r
- * Method addSetting\r
- * \r
- * \r
- * \r
- * @param index\r
- * @param vSetting\r
- */\r
- public void addSetting(int index, jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- _settingList.insertElementAt(vSetting, index);\r
- } //-- void addSetting(int, jalview.schemabinding.version2.Setting) \r
-\r
- /**\r
- * Method enumerateGroup\r
- * \r
- * \r
- * \r
- * @return Enumeration\r
- */\r
- public java.util.Enumeration enumerateGroup()\r
- {\r
- return _groupList.elements();\r
- } //-- java.util.Enumeration enumerateGroup() \r
-\r
- /**\r
- * Method enumerateSetting\r
- * \r
- * \r
- * \r
- * @return Enumeration\r
- */\r
- public java.util.Enumeration enumerateSetting()\r
- {\r
- return _settingList.elements();\r
- } //-- java.util.Enumeration enumerateSetting() \r
-\r
- /**\r
- * Method getGroup\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return Group\r
- */\r
- public jalview.schemabinding.version2.Group getGroup(int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _groupList.size())) {\r
- throw new IndexOutOfBoundsException();\r
- }\r
- \r
- return (jalview.schemabinding.version2.Group) _groupList.elementAt(index);\r
- } //-- jalview.schemabinding.version2.Group getGroup(int) \r
-\r
- /**\r
- * Method getGroup\r
- * \r
- * \r
- * \r
- * @return Group\r
- */\r
- public jalview.schemabinding.version2.Group[] getGroup()\r
- {\r
- int size = _groupList.size();\r
- jalview.schemabinding.version2.Group[] mArray = new jalview.schemabinding.version2.Group[size];\r
- for (int index = 0; index < size; index++) {\r
- mArray[index] = (jalview.schemabinding.version2.Group) _groupList.elementAt(index);\r
- }\r
- return mArray;\r
- } //-- jalview.schemabinding.version2.Group[] getGroup() \r
-\r
- /**\r
- * Method getGroupCount\r
- * \r
- * \r
- * \r
- * @return int\r
- */\r
- public int getGroupCount()\r
- {\r
- return _groupList.size();\r
- } //-- int getGroupCount() \r
-\r
- /**\r
- * Method getSetting\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return Setting\r
- */\r
- public jalview.schemabinding.version2.Setting getSetting(int index)\r
- throws java.lang.IndexOutOfBoundsException\r
- {\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _settingList.size())) {\r
- throw new IndexOutOfBoundsException();\r
- }\r
- \r
- return (jalview.schemabinding.version2.Setting) _settingList.elementAt(index);\r
- } //-- jalview.schemabinding.version2.Setting getSetting(int) \r
-\r
- /**\r
- * Method getSetting\r
- * \r
- * \r
- * \r
- * @return Setting\r
- */\r
- public jalview.schemabinding.version2.Setting[] getSetting()\r
- {\r
- int size = _settingList.size();\r
- jalview.schemabinding.version2.Setting[] mArray = new jalview.schemabinding.version2.Setting[size];\r
- for (int index = 0; index < size; index++) {\r
- mArray[index] = (jalview.schemabinding.version2.Setting) _settingList.elementAt(index);\r
- }\r
- return mArray;\r
- } //-- jalview.schemabinding.version2.Setting[] getSetting() \r
-\r
- /**\r
- * Method getSettingCount\r
- * \r
- * \r
- * \r
- * @return int\r
- */\r
- public int getSettingCount()\r
- {\r
- return _settingList.size();\r
- } //-- int getSettingCount() \r
-\r
- /**\r
- * Method isValid\r
- * \r
- * \r
- * \r
- * @return boolean\r
- */\r
- public boolean isValid()\r
- {\r
- try {\r
- validate();\r
- }\r
- catch (org.exolab.castor.xml.ValidationException vex) {\r
- return false;\r
- }\r
- return true;\r
- } //-- boolean isValid() \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param out\r
- */\r
- public void marshal(java.io.Writer out)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, out);\r
- } //-- void marshal(java.io.Writer) \r
-\r
- /**\r
- * Method marshal\r
- * \r
- * \r
- * \r
- * @param handler\r
- */\r
- public void marshal(org.xml.sax.ContentHandler handler)\r
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
- {\r
- \r
- Marshaller.marshal(this, handler);\r
- } //-- void marshal(org.xml.sax.ContentHandler) \r
-\r
- /**\r
- * Method removeAllGroup\r
- * \r
- */\r
- public void removeAllGroup()\r
- {\r
- _groupList.removeAllElements();\r
- } //-- void removeAllGroup() \r
-\r
- /**\r
- * Method removeAllSetting\r
- * \r
- */\r
- public void removeAllSetting()\r
- {\r
- _settingList.removeAllElements();\r
- } //-- void removeAllSetting() \r
-\r
- /**\r
- * Method removeGroup\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return Group\r
- */\r
- public jalview.schemabinding.version2.Group removeGroup(int index)\r
+public class FeatureSettings implements java.io.Serializable\r
+{\r
+\r
+ // --------------------------/\r
+ // - Class/Member Variables -/\r
+ // --------------------------/\r
+\r
+ /**\r
+ * Field _settingList.\r
+ */\r
+ private java.util.Vector _settingList;\r
+\r
+ /**\r
+ * Field _groupList.\r
+ */\r
+ private java.util.Vector _groupList;\r
+\r
+ // ----------------/\r
+ // - Constructors -/\r
+ // ----------------/\r
+\r
+ public FeatureSettings()\r
+ {\r
+ super();\r
+ this._settingList = new java.util.Vector();\r
+ this._groupList = new java.util.Vector();\r
+ }\r
+\r
+ // -----------/\r
+ // - Methods -/\r
+ // -----------/\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addGroup(final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._groupList.addElement(vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addGroup(final int index,\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._groupList.add(index, vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addSetting(\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._settingList.addElement(vSetting);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void addSetting(final int index,\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ this._settingList.add(index, vSetting);\r
+ }\r
+\r
+ /**\r
+ * Method enumerateGroup.\r
+ * \r
+ * @return an Enumeration over all jalview.schemabinding.version2.Group\r
+ * elements\r
+ */\r
+ public java.util.Enumeration enumerateGroup()\r
+ {\r
+ return this._groupList.elements();\r
+ }\r
+\r
+ /**\r
+ * Method enumerateSetting.\r
+ * \r
+ * @return an Enumeration over all jalview.schemabinding.version2.Setting\r
+ * elements\r
+ */\r
+ public java.util.Enumeration enumerateSetting()\r
+ {\r
+ return this._settingList.elements();\r
+ }\r
+\r
+ /**\r
+ * Method getGroup.\r
+ * \r
+ * @param index\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ * @return the value of the jalview.schemabinding.version2.Group at the given\r
+ * index\r
+ */\r
+ public jalview.schemabinding.version2.Group getGroup(final int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._groupList.size())\r
{\r
- java.lang.Object obj = _groupList.elementAt(index);\r
- _groupList.removeElementAt(index);\r
- return (jalview.schemabinding.version2.Group) obj;\r
- } //-- jalview.schemabinding.version2.Group removeGroup(int) \r
-\r
- /**\r
- * Method removeSetting\r
- * \r
- * \r
- * \r
- * @param index\r
- * @return Setting\r
- */\r
- public jalview.schemabinding.version2.Setting removeSetting(int index)\r
+ throw new IndexOutOfBoundsException("getGroup: Index value '" + index\r
+ + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+ }\r
+\r
+ return (jalview.schemabinding.version2.Group) _groupList.get(index);\r
+ }\r
+\r
+ /**\r
+ * Method getGroup.Returns the contents of the collection in an Array.\r
+ * <p>\r
+ * Note: Just in case the collection contents are changing in another thread,\r
+ * we pass a 0-length Array of the correct type into the API call. This way we\r
+ * <i>know</i> that the Array returned is of exactly the correct length.\r
+ * \r
+ * @return this collection as an Array\r
+ */\r
+ public jalview.schemabinding.version2.Group[] getGroup()\r
+ {\r
+ jalview.schemabinding.version2.Group[] array = new jalview.schemabinding.version2.Group[0];\r
+ return (jalview.schemabinding.version2.Group[]) this._groupList\r
+ .toArray(array);\r
+ }\r
+\r
+ /**\r
+ * Method getGroupCount.\r
+ * \r
+ * @return the size of this collection\r
+ */\r
+ public int getGroupCount()\r
+ {\r
+ return this._groupList.size();\r
+ }\r
+\r
+ /**\r
+ * Method getSetting.\r
+ * \r
+ * @param index\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ * @return the value of the jalview.schemabinding.version2.Setting at the\r
+ * given index\r
+ */\r
+ public jalview.schemabinding.version2.Setting getSetting(final int index)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._settingList.size())\r
{\r
- java.lang.Object obj = _settingList.elementAt(index);\r
- _settingList.removeElementAt(index);\r
- return (jalview.schemabinding.version2.Setting) obj;\r
- } //-- jalview.schemabinding.version2.Setting removeSetting(int) \r
-\r
- /**\r
- * Method setGroup\r
- * \r
- * \r
- * \r
- * @param index\r
- * @param vGroup\r
- */\r
- public void setGroup(int index, jalview.schemabinding.version2.Group vGroup)\r
- throws java.lang.IndexOutOfBoundsException\r
+ throw new IndexOutOfBoundsException("getSetting: Index value '"\r
+ + index + "' not in range [0.."\r
+ + (this._settingList.size() - 1) + "]");\r
+ }\r
+\r
+ return (jalview.schemabinding.version2.Setting) _settingList.get(index);\r
+ }\r
+\r
+ /**\r
+ * Method getSetting.Returns the contents of the collection in an Array.\r
+ * <p>\r
+ * Note: Just in case the collection contents are changing in another thread,\r
+ * we pass a 0-length Array of the correct type into the API call. This way we\r
+ * <i>know</i> that the Array returned is of exactly the correct length.\r
+ * \r
+ * @return this collection as an Array\r
+ */\r
+ public jalview.schemabinding.version2.Setting[] getSetting()\r
+ {\r
+ jalview.schemabinding.version2.Setting[] array = new jalview.schemabinding.version2.Setting[0];\r
+ return (jalview.schemabinding.version2.Setting[]) this._settingList\r
+ .toArray(array);\r
+ }\r
+\r
+ /**\r
+ * Method getSettingCount.\r
+ * \r
+ * @return the size of this collection\r
+ */\r
+ public int getSettingCount()\r
+ {\r
+ return this._settingList.size();\r
+ }\r
+\r
+ /**\r
+ * Method isValid.\r
+ * \r
+ * @return true if this object is valid according to the schema\r
+ */\r
+ public boolean isValid()\r
+ {\r
+ try\r
{\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _groupList.size())) {\r
- throw new IndexOutOfBoundsException();\r
- }\r
- _groupList.setElementAt(vGroup, index);\r
- } //-- void setGroup(int, jalview.schemabinding.version2.Group) \r
-\r
- /**\r
- * Method setGroup\r
- * \r
- * \r
- * \r
- * @param groupArray\r
- */\r
- public void setGroup(jalview.schemabinding.version2.Group[] groupArray)\r
+ validate();\r
+ } catch (org.exolab.castor.xml.ValidationException vex)\r
{\r
- //-- copy array\r
- _groupList.removeAllElements();\r
- for (int i = 0; i < groupArray.length; i++) {\r
- _groupList.addElement(groupArray[i]);\r
- }\r
- } //-- void setGroup(jalview.schemabinding.version2.Group) \r
-\r
- /**\r
- * Method setSetting\r
- * \r
- * \r
- * \r
- * @param index\r
- * @param vSetting\r
- */\r
- public void setSetting(int index, jalview.schemabinding.version2.Setting vSetting)\r
- throws java.lang.IndexOutOfBoundsException\r
+ return false;\r
+ }\r
+ return true;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param out\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the\r
+ * schema\r
+ */\r
+ public void marshal(final java.io.Writer out)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ Marshaller.marshal(this, out);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param handler\r
+ * @throws java.io.IOException\r
+ * if an IOException occurs during marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the\r
+ * schema\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ */\r
+ public void marshal(final org.xml.sax.ContentHandler handler)\r
+ throws java.io.IOException,\r
+ org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ Marshaller.marshal(this, handler);\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void removeAllGroup()\r
+ {\r
+ this._groupList.clear();\r
+ }\r
+\r
+ /**\r
+ */\r
+ public void removeAllSetting()\r
+ {\r
+ this._settingList.clear();\r
+ }\r
+\r
+ /**\r
+ * Method removeGroup.\r
+ * \r
+ * @param vGroup\r
+ * @return true if the object was removed from the collection.\r
+ */\r
+ public boolean removeGroup(\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ {\r
+ boolean removed = _groupList.remove(vGroup);\r
+ return removed;\r
+ }\r
+\r
+ /**\r
+ * Method removeGroupAt.\r
+ * \r
+ * @param index\r
+ * @return the element removed from the collection\r
+ */\r
+ public jalview.schemabinding.version2.Group removeGroupAt(final int index)\r
+ {\r
+ java.lang.Object obj = this._groupList.remove(index);\r
+ return (jalview.schemabinding.version2.Group) obj;\r
+ }\r
+\r
+ /**\r
+ * Method removeSetting.\r
+ * \r
+ * @param vSetting\r
+ * @return true if the object was removed from the collection.\r
+ */\r
+ public boolean removeSetting(\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ {\r
+ boolean removed = _settingList.remove(vSetting);\r
+ return removed;\r
+ }\r
+\r
+ /**\r
+ * Method removeSettingAt.\r
+ * \r
+ * @param index\r
+ * @return the element removed from the collection\r
+ */\r
+ public jalview.schemabinding.version2.Setting removeSettingAt(\r
+ final int index)\r
+ {\r
+ java.lang.Object obj = this._settingList.remove(index);\r
+ return (jalview.schemabinding.version2.Setting) obj;\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vGroup\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void setGroup(final int index,\r
+ final jalview.schemabinding.version2.Group vGroup)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._groupList.size())\r
{\r
- //-- check bounds for index\r
- if ((index < 0) || (index > _settingList.size())) {\r
- throw new IndexOutOfBoundsException();\r
- }\r
- _settingList.setElementAt(vSetting, index);\r
- } //-- void setSetting(int, jalview.schemabinding.version2.Setting) \r
-\r
- /**\r
- * Method setSetting\r
- * \r
- * \r
- * \r
- * @param settingArray\r
- */\r
- public void setSetting(jalview.schemabinding.version2.Setting[] settingArray)\r
+ throw new IndexOutOfBoundsException("setGroup: Index value '" + index\r
+ + "' not in range [0.." + (this._groupList.size() - 1) + "]");\r
+ }\r
+\r
+ this._groupList.set(index, vGroup);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vGroupArray\r
+ */\r
+ public void setGroup(\r
+ final jalview.schemabinding.version2.Group[] vGroupArray)\r
+ {\r
+ // -- copy array\r
+ _groupList.clear();\r
+\r
+ for (int i = 0; i < vGroupArray.length; i++)\r
{\r
- //-- copy array\r
- _settingList.removeAllElements();\r
- for (int i = 0; i < settingArray.length; i++) {\r
- _settingList.addElement(settingArray[i]);\r
- }\r
- } //-- void setSetting(jalview.schemabinding.version2.Setting) \r
-\r
- /**\r
- * Method unmarshal\r
- * \r
- * \r
- * \r
- * @param reader\r
- * @return Object\r
- */\r
- public static java.lang.Object unmarshal(java.io.Reader reader)\r
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException\r
+ this._groupList.add(vGroupArray[i]);\r
+ }\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param index\r
+ * @param vSetting\r
+ * @throws java.lang.IndexOutOfBoundsException\r
+ * if the index given is outside the bounds of the collection\r
+ */\r
+ public void setSetting(final int index,\r
+ final jalview.schemabinding.version2.Setting vSetting)\r
+ throws java.lang.IndexOutOfBoundsException\r
+ {\r
+ // check bounds for index\r
+ if (index < 0 || index >= this._settingList.size())\r
{\r
- return (jalview.schemabinding.version2.FeatureSettings) Unmarshaller.unmarshal(jalview.schemabinding.version2.FeatureSettings.class, reader);\r
- } //-- java.lang.Object unmarshal(java.io.Reader) \r
-\r
- /**\r
- * Method validate\r
- * \r
- */\r
- public void validate()\r
- throws org.exolab.castor.xml.ValidationException\r
+ throw new IndexOutOfBoundsException("setSetting: Index value '"\r
+ + index + "' not in range [0.."\r
+ + (this._settingList.size() - 1) + "]");\r
+ }\r
+\r
+ this._settingList.set(index, vSetting);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @param vSettingArray\r
+ */\r
+ public void setSetting(\r
+ final jalview.schemabinding.version2.Setting[] vSettingArray)\r
+ {\r
+ // -- copy array\r
+ _settingList.clear();\r
+\r
+ for (int i = 0; i < vSettingArray.length; i++)\r
{\r
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
- validator.validate(this);\r
- } //-- void validate() \r
+ this._settingList.add(vSettingArray[i]);\r
+ }\r
+ }\r
+\r
+ /**\r
+ * Method unmarshal.\r
+ * \r
+ * @param reader\r
+ * @throws org.exolab.castor.xml.MarshalException\r
+ * if object is null or if any SAXException is thrown during\r
+ * marshaling\r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the\r
+ * schema\r
+ * @return the unmarshaled jalview.schemabinding.version2.FeatureSettings\r
+ */\r
+ public static jalview.schemabinding.version2.FeatureSettings unmarshal(\r
+ final java.io.Reader reader)\r
+ throws org.exolab.castor.xml.MarshalException,\r
+ org.exolab.castor.xml.ValidationException\r
+ {\r
+ return (jalview.schemabinding.version2.FeatureSettings) Unmarshaller\r
+ .unmarshal(\r
+ jalview.schemabinding.version2.FeatureSettings.class,\r
+ reader);\r
+ }\r
+\r
+ /**\r
+ * \r
+ * \r
+ * @throws org.exolab.castor.xml.ValidationException\r
+ * if this object is an invalid instance according to the\r
+ * schema\r
+ */\r
+ public void validate() throws org.exolab.castor.xml.ValidationException\r
+ {\r
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();\r
+ validator.validate(this);\r
+ }\r
\r
}\r
git://source.jalview.org / jalview.git / blobdiff