Merge remote-tracking branch
[jalview.git] / src / jalview / schemabinding / version2 / descriptors / JalviewModelSequenceDescriptor.java
index 2099ed1..e74d8dd 100644 (file)
@@ -1,27 +1,14 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
- * Copyright (C) $$Year-Rel$$ The Jalview Authors
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3
- * of the License, or (at your option) any later version.
- *  
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License
- * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- * The Jalview Authors are detailed in the 'AUTHORS' file.
+ * This class was automatically generated with 
+ * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
+ * Schema.
+ * $Id$
  */
+
 package jalview.schemabinding.version2.descriptors;
 
-//---------------------------------/
-//- Imported classes and packages -/
+  //---------------------------------/
+ //- Imported classes and packages -/
 //---------------------------------/
 
 import jalview.schemabinding.version2.JalviewModelSequence;
@@ -31,457 +18,385 @@ import jalview.schemabinding.version2.JalviewModelSequence;
  * 
  * @version $Revision$ $Date$
  */
-public class JalviewModelSequenceDescriptor extends
-        org.exolab.castor.xml.util.XMLClassDescriptorImpl
-{
-
-  // --------------------------/
-  // - Class/Member Variables -/
-  // --------------------------/
-
-  /**
-   * Field _elementDefinition.
-   */
-  private boolean _elementDefinition;
-
-  /**
-   * Field _nsPrefix.
-   */
-  private java.lang.String _nsPrefix;
-
-  /**
-   * Field _nsURI.
-   */
-  private java.lang.String _nsURI;
-
-  /**
-   * Field _xmlName.
-   */
-  private java.lang.String _xmlName;
-
-  // ----------------/
-  // - Constructors -/
-  // ----------------/
-
-  public JalviewModelSequenceDescriptor()
-  {
-    super();
-    _nsURI = "www.jalview.org";
-    _elementDefinition = false;
-
-    // -- set grouping compositor
-    setCompositorAsSequence();
-    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
-    org.exolab.castor.mapping.FieldHandler handler = null;
-    org.exolab.castor.xml.FieldValidator fieldValidator = null;
-    // -- initialize attribute descriptors
-
-    // -- initialize element descriptors
-
-    // -- _JSeqList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.JSeq.class, "_JSeqList", "JSeq",
-            org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getJSeq();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.addJSeq((jalview.schemabinding.version2.JSeq) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+public class JalviewModelSequenceDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
+
+
+      //--------------------------/
+     //- Class/Member Variables -/
+    //--------------------------/
+
+    /**
+     * Field _elementDefinition.
+     */
+    private boolean _elementDefinition;
+
+    /**
+     * Field _nsPrefix.
+     */
+    private java.lang.String _nsPrefix;
+
+    /**
+     * Field _nsURI.
+     */
+    private java.lang.String _nsURI;
+
+    /**
+     * Field _xmlName.
+     */
+    private java.lang.String _xmlName;
+
+
+      //----------------/
+     //- Constructors -/
+    //----------------/
+
+    public JalviewModelSequenceDescriptor() {
+        super();
+        _nsURI = "www.jalview.org";
+        _elementDefinition = false;
+        
+        //-- set grouping compositor
+        setCompositorAsSequence();
+        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
+        org.exolab.castor.mapping.FieldHandler             handler        = null;
+        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
+        //-- initialize attribute descriptors
+        
+        //-- initialize element descriptors
+        
+        //-- _JSeqList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JSeq.class, "_JSeqList", "JSeq", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getJSeq();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.addJSeq( (jalview.schemabinding.version2.JSeq) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.removeAllJSeq();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.JSeq();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _JSeqList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public void resetValue(Object object) throws IllegalStateException,
-              IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.removeAllJSeq();
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _JGroupList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.JGroup.class, "_JGroupList", "JGroup", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getJGroup();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.addJGroup( (jalview.schemabinding.version2.JGroup) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.removeAllJGroup();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.JGroup();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _JGroupList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.JSeq();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
-
-    // -- validation code for: _JSeqList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { // -- local scope
-    }
-    desc.setValidator(fieldValidator);
-    // -- _JGroupList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.JGroup.class, "_JGroupList",
-            "JGroup", org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getJGroup();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.addJGroup((jalview.schemabinding.version2.JGroup) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _viewportList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Viewport.class, "_viewportList", "Viewport", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getViewport();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.addViewport( (jalview.schemabinding.version2.Viewport) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.removeAllViewport();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.Viewport();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _viewportList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public void resetValue(Object object) throws IllegalStateException,
-              IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.removeAllJGroup();
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _userColoursList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.UserColours.class, "_userColoursList", "UserColours", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getUserColours();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.addUserColours( (jalview.schemabinding.version2.UserColours) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.removeAllUserColours();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.UserColours();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _userColoursList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.JGroup();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
-
-    // -- validation code for: _JGroupList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { // -- local scope
-    }
-    desc.setValidator(fieldValidator);
-    // -- _viewportList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.Viewport.class, "_viewportList",
-            "Viewport", org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getViewport();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.addViewport((jalview.schemabinding.version2.Viewport) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _treeList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.Tree.class, "_treeList", "tree", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getTree();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.addTree( (jalview.schemabinding.version2.Tree) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.removeAllTree();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.Tree();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _treeList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public void resetValue(Object object) throws IllegalStateException,
-              IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.removeAllViewport();
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _featureSettings
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.FeatureSettings.class, "_featureSettings", "FeatureSettings", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                JalviewModelSequence target = (JalviewModelSequence) object;
+                return target.getFeatureSettings();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    JalviewModelSequence target = (JalviewModelSequence) object;
+                    target.setFeatureSettings( (jalview.schemabinding.version2.FeatureSettings) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.FeatureSettings();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(false);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _featureSettings
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.Viewport();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
-
-    // -- validation code for: _viewportList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { // -- local scope
+        desc.setValidator(fieldValidator);
     }
-    desc.setValidator(fieldValidator);
-    // -- _userColoursList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.UserColours.class,
-            "_userColoursList", "UserColours",
-            org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getUserColours();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.addUserColours((jalview.schemabinding.version2.UserColours) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
 
-      public void resetValue(Object object) throws IllegalStateException,
-              IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.removeAllUserColours();
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
 
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.UserColours();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
+      //-----------/
+     //- Methods -/
+    //-----------/
 
-    // -- validation code for: _userColoursList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { // -- local scope
+    /**
+     * Method getAccessMode.
+     * 
+     * @return the access mode specified for this class.
+     */
+    public org.exolab.castor.mapping.AccessMode getAccessMode(
+    ) {
+        return null;
     }
-    desc.setValidator(fieldValidator);
-    // -- _treeList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.Tree.class, "_treeList", "tree",
-            org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getTree();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.addTree((jalview.schemabinding.version2.Tree) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public void resetValue(Object object) throws IllegalStateException,
-              IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.removeAllTree();
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.Tree();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
 
-    // -- validation code for: _treeList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { // -- local scope
+    /**
+     * Method getIdentity.
+     * 
+     * @return the identity field, null if this class has no
+     * identity.
+     */
+    public org.exolab.castor.mapping.FieldDescriptor getIdentity(
+    ) {
+        return super.getIdentity();
     }
-    desc.setValidator(fieldValidator);
-    // -- _featureSettings
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
-            jalview.schemabinding.version2.FeatureSettings.class,
-            "_featureSettings", "FeatureSettings",
-            org.exolab.castor.xml.NodeType.Element);
-    handler = new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-              throws IllegalStateException
-      {
-        JalviewModelSequence target = (JalviewModelSequence) object;
-        return target.getFeatureSettings();
-      }
 
-      public void setValue(java.lang.Object object, java.lang.Object value)
-              throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          JalviewModelSequence target = (JalviewModelSequence) object;
-          target.setFeatureSettings((jalview.schemabinding.version2.FeatureSettings) value);
-        } catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.FeatureSettings();
-      }
-    };
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(false);
-    addFieldDescriptor(desc);
-
-    // -- validation code for: _featureSettings
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    { // -- local scope
+    /**
+     * Method getJavaClass.
+     * 
+     * @return the Java class represented by this descriptor.
+     */
+    public java.lang.Class getJavaClass(
+    ) {
+        return jalview.schemabinding.version2.JalviewModelSequence.class;
     }
-    desc.setValidator(fieldValidator);
-  }
-
-  // -----------/
-  // - Methods -/
-  // -----------/
-
-  /**
-   * Method getAccessMode.
-   * 
-   * @return the access mode specified for this class.
-   */
-  public org.exolab.castor.mapping.AccessMode getAccessMode()
-  {
-    return null;
-  }
-
-  /**
-   * Method getIdentity.
-   * 
-   * @return the identity field, null if this class has no identity.
-   */
-  public org.exolab.castor.mapping.FieldDescriptor getIdentity()
-  {
-    return super.getIdentity();
-  }
 
-  /**
-   * Method getJavaClass.
-   * 
-   * @return the Java class represented by this descriptor.
-   */
-  public java.lang.Class getJavaClass()
-  {
-    return jalview.schemabinding.version2.JalviewModelSequence.class;
-  }
-
-  /**
-   * Method getNameSpacePrefix.
-   * 
-   * @return the namespace prefix to use when marshaling as XML.
-   */
-  public java.lang.String getNameSpacePrefix()
-  {
-    return _nsPrefix;
-  }
+    /**
+     * Method getNameSpacePrefix.
+     * 
+     * @return the namespace prefix to use when marshaling as XML.
+     */
+    public java.lang.String getNameSpacePrefix(
+    ) {
+        return _nsPrefix;
+    }
 
-  /**
-   * Method getNameSpaceURI.
-   * 
-   * @return the namespace URI used when marshaling and unmarshaling as XML.
-   */
-  public java.lang.String getNameSpaceURI()
-  {
-    return _nsURI;
-  }
+    /**
+     * Method getNameSpaceURI.
+     * 
+     * @return the namespace URI used when marshaling and
+     * unmarshaling as XML.
+     */
+    public java.lang.String getNameSpaceURI(
+    ) {
+        return _nsURI;
+    }
 
-  /**
-   * Method getValidator.
-   * 
-   * @return a specific validator for the class described by this
-   *         ClassDescriptor.
-   */
-  public org.exolab.castor.xml.TypeValidator getValidator()
-  {
-    return this;
-  }
+    /**
+     * Method getValidator.
+     * 
+     * @return a specific validator for the class described by this
+     * ClassDescriptor.
+     */
+    public org.exolab.castor.xml.TypeValidator getValidator(
+    ) {
+        return this;
+    }
 
-  /**
-   * Method getXMLName.
-   * 
-   * @return the XML Name for the Class being described.
-   */
-  public java.lang.String getXMLName()
-  {
-    return _xmlName;
-  }
+    /**
+     * Method getXMLName.
+     * 
+     * @return the XML Name for the Class being described.
+     */
+    public java.lang.String getXMLName(
+    ) {
+        return _xmlName;
+    }
 
-  /**
-   * Method isElementDefinition.
-   * 
-   * @return true if XML schema definition of this Class is that of a global
-   *         element or element with anonymous type definition.
-   */
-  public boolean isElementDefinition()
-  {
-    return _elementDefinition;
-  }
+    /**
+     * Method isElementDefinition.
+     * 
+     * @return true if XML schema definition of this Class is that
+     * of a global
+     * element or element with anonymous type definition.
+     */
+    public boolean isElementDefinition(
+    ) {
+        return _elementDefinition;
+    }
 
 }