JAL-3675 release notes for JAL-3750 JAL-3751
[jalview.git] / src / jalview / schemes / Blosum62ColourScheme.java
index 8ac8731..8188f4d 100755 (executable)
  */
 package jalview.schemes;
 
-import jalview.analysis.scoremodels.PairwiseScoreModelI;
 import jalview.analysis.scoremodels.ScoreModels;
+import jalview.api.AlignViewportI;
+import jalview.api.analysis.PairwiseScoreModelI;
 import jalview.datamodel.AnnotatedCollectionI;
-import jalview.datamodel.SequenceCollectionI;
 import jalview.datamodel.SequenceI;
 import jalview.util.Comparison;
 
 import java.awt.Color;
-import java.util.Map;
 
 public class Blosum62ColourScheme extends ResidueColourScheme
 {
   private static final Color LIGHT_BLUE = new Color(204, 204, 255);
+
   private static final Color DARK_BLUE = new Color(154, 154, 255);
 
   public Blosum62ColourScheme()
@@ -45,8 +45,8 @@ public class Blosum62ColourScheme extends ResidueColourScheme
    * be coloured
    */
   @Override
-  public ColourSchemeI getInstance(AnnotatedCollectionI coll,
-          Map<SequenceI, SequenceCollectionI> hrs)
+  public ColourSchemeI getInstance(AlignViewportI view,
+          AnnotatedCollectionI coll)
   {
     return new Blosum62ColourScheme();
   }