JAL-1705 fetch Uniprot and PDB xrefs for Ensembl protein products

[jalview.git] / src / jalview / util / DBRefUtils.java

diff --git a/src/jalview/util/DBRefUtils.java b/src/jalview/util/DBRefUtils.java
index c85a489..e7053ed 100755 (executable)
--- a/src/jalview/util/DBRefUtils.java
+++ b/src/jalview/util/DBRefUtils.java
@@ -52,6 +52,11 @@ public class DBRefUtils
     canonicalSourceNameLookup.put("uniprotkb/swiss-prot",
             DBRefSource.UNIPROT);
     canonicalSourceNameLookup.put("uniprotkb/trembl", DBRefSource.UNIPROT);
+
+    // Ensembl values for dbname in xref REST service:
+    canonicalSourceNameLookup.put("uniprot/sptrembl", DBRefSource.UNIPROT);
+    canonicalSourceNameLookup.put("uniprot/swissprot", DBRefSource.UNIPROT);
+
     canonicalSourceNameLookup.put("pdb", DBRefSource.PDB);
     canonicalSourceNameLookup.put("ensembl", DBRefSource.ENSEMBL);