JAL-1942 JAL-1479 DBRefFetcher refactor

[jalview.git] / src / jalview / ws / DasSequenceFeatureFetcher.java

diff --git a/src/jalview/ws/DasSequenceFeatureFetcher.java b/src/jalview/ws/DasSequenceFeatureFetcher.java
index 8faba60..d7ba24d 100644 (file)
--- a/src/jalview/ws/DasSequenceFeatureFetcher.java
+++ b/src/jalview/ws/DasSequenceFeatureFetcher.java
@@ -238,6 +238,7 @@ public class DasSequenceFeatureFetcher
 
   class FetchSeqFeatures implements Runnable
   {
+    @Override
     public void run()
     {
       startFetching();
@@ -247,10 +248,15 @@ public class DasSequenceFeatureFetcher
 
   class FetchDBRefs implements Runnable
   {
+    @Override
     public void run()
     {
       running = true;
-      new DBRefFetcher(sequences, af).fetchDBRefs(true);
+      boolean isNuclueotide = af.getViewport().getAlignment()
+              .isNucleotide();
+      new jalview.ws.DBRefFetcher(sequences, af, null, af.featureSettings,
+              isNuclueotide).fetchDBRefs(true);
+
       startFetching();
       setGuiFetchComplete();
     }