JAL-1479 JAL-1979 updated the modified-aminoacid triplet code dictionary in Jalview...

[jalview.git] / src / jalview / ws / sifts / SiftsClient.java

diff --git a/src/jalview/ws/sifts/SiftsClient.java b/src/jalview/ws/sifts/SiftsClient.java
index 7d5ae2e..9f7bc52 100644 (file)
--- a/src/jalview/ws/sifts/SiftsClient.java
+++ b/src/jalview/ws/sifts/SiftsClient.java
@@ -546,7 +546,8 @@ public class SiftsClient implements SiftsClientI
                   || seqCoordSys == CoordinateSys.UNIPROT)
           {
             char resCharCode = ResidueProperties
-                    .getSingleCharacterCode(residue.getDbResName());
+                    .getSingleCharacterCode(ResidueProperties
+                            .getCanonicalAminoAcid(residue.getDbResName()));
             resNumMap.put(currSeqIndex, String.valueOf(resCharCode));
           }
           else