JAL-3807 Fix SlivkaWSInstance not fetching alignments.

[jalview.git] / src / jalview / ws / slivkaws / SlivkaJPredServiceInstance.java

diff --git a/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java b/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
index a614f02..00843fc 100644 (file)
--- a/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
+++ b/src/jalview/ws/slivkaws/SlivkaJPredServiceInstance.java
@@ -36,7 +36,11 @@ public class SlivkaJPredServiceInstance extends SlivkaWSInstance
     try {
       files = client.getJobResults(jobId.getJobId());
       for (RemoteFile f : files) {
-        return readAlignment(f);
+        if (f.getMimeType().equals("application/clustal")
+            || f.getMimeType().equals("application/fasta"))
+        {
+          return readAlignment(f);
+        }
       }
     }
     catch (IOException e) {