{
switch (path[path.length - 1].toLowerCase())
{
- case "sequence alignment analysis (conservation)":
+ case "rna secondary structure prediction":
AnnotationOperation anop;
op = anop = new AnnotationOperation(instance,
instance::getAnnotations, instance::getFeaturesFile,
+ "Secondary Structure Prediction");
+ anop.setInteractive(true);
+ anop.setAlignmentAnalysis(true);
+ anop.setProteinOperation(false);
+ break;
+ case "sequence alignment analysis (conservation)":
+ op = anop = new AnnotationOperation(instance,
+ instance::getAnnotations, instance::getFeaturesFile,
"Conservation");
anop.setAlignmentAnalysis(true);
anop.setInteractive(true);