header updated

[jalview.git] / src / vamsas / objects / simple / Alignment.java

diff --git a/src/vamsas/objects/simple/Alignment.java b/src/vamsas/objects/simple/Alignment.java
index 574a1e9..0055baf 100755 (executable)
--- a/src/vamsas/objects/simple/Alignment.java
+++ b/src/vamsas/objects/simple/Alignment.java
@@ -1,27 +1,27 @@
-/**
- * Alignment.java
- *
- * This file was auto-generated from WSDL
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
+/**\r
+ * Alignment.java\r
+ *\r
+ * This file was auto-generated from WSDL\r
+ * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.\r
  */\r
 \r
-/*
-* Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
-*
-* This program is free software; you can redistribute it and/or
-* modify it under the terms of the GNU General Public License
-* as published by the Free Software Foundation; either version 2
-* of the License, or (at your option) any later version.
-*
-* This program is distributed in the hope that it will be useful,
-* but WITHOUT ANY WARRANTY; without even the implied warranty of
-* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-* GNU General Public License for more details.
-*
-* You should have received a copy of the GNU General Public License
-* along with this program; if not, write to the Free Software
-* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+/*\r
+* Jalview - A Sequence Alignment Editor and Viewer\r
+* Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle\r
+*\r
+* This program is free software; you can redistribute it and/or\r
+* modify it under the terms of the GNU General Public License\r
+* as published by the Free Software Foundation; either version 2\r
+* of the License, or (at your option) any later version.\r
+*\r
+* This program is distributed in the hope that it will be useful,\r
+* but WITHOUT ANY WARRANTY; without even the implied warranty of\r
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the\r
+* GNU General Public License for more details.\r
+*\r
+* You should have received a copy of the GNU General Public License\r
+* along with this program; if not, write to the Free Software\r
+* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA\r
 */\r
 package vamsas.objects.simple;\r
 \r
@@ -43,55 +43,55 @@ public class Alignment extends vamsas.objects.simple.Object
         this.seqs = seqs;\r
     }\r
 \r
-    /**
- * Gets the gapchar value for this Alignment.
- *
- * @return gapchar
+    /**\r
+ * Gets the gapchar value for this Alignment.\r
+ *\r
+ * @return gapchar\r
  */\r
     public java.lang.String getGapchar() {\r
         return gapchar;\r
     }\r
 \r
-    /**
- * Sets the gapchar value for this Alignment.
- *
- * @param gapchar
+    /**\r
+ * Sets the gapchar value for this Alignment.\r
+ *\r
+ * @param gapchar\r
  */\r
     public void setGapchar(java.lang.String gapchar) {\r
         this.gapchar = gapchar;\r
     }\r
 \r
-    /**
- * Gets the method value for this Alignment.
- *
- * @return method
+    /**\r
+ * Gets the method value for this Alignment.\r
+ *\r
+ * @return method\r
  */\r
     public java.lang.String[] getMethod() {\r
         return method;\r
     }\r
 \r
-    /**
- * Sets the method value for this Alignment.
- *
- * @param method
+    /**\r
+ * Sets the method value for this Alignment.\r
+ *\r
+ * @param method\r
  */\r
     public void setMethod(java.lang.String[] method) {\r
         this.method = method;\r
     }\r
 \r
-    /**
- * Gets the seqs value for this Alignment.
- *
- * @return seqs
+    /**\r
+ * Gets the seqs value for this Alignment.\r
+ *\r
+ * @return seqs\r
  */\r
     public vamsas.objects.simple.SequenceSet getSeqs() {\r
         return seqs;\r
     }\r
 \r
-    /**
- * Sets the seqs value for this Alignment.
- *
- * @param seqs
+    /**\r
+ * Sets the seqs value for this Alignment.\r
+ *\r
+ * @param seqs\r
  */\r
     public void setSeqs(vamsas.objects.simple.SequenceSet seqs) {\r
         this.seqs = seqs;\r