Merge branch 'Jalview-JS/develop' into merge/Ben_trying_out_JSdevelop_with_develop

[jalview.git] / srcjar / fr / orsay / lri / varna / exceptions / ExceptionUnmatchedClosingParentheses.java

diff --git a/srcjar/fr/orsay/lri/varna/exceptions/ExceptionUnmatchedClosingParentheses.java b/srcjar/fr/orsay/lri/varna/exceptions/ExceptionUnmatchedClosingParentheses.java
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+++ b/srcjar/fr/orsay/lri/varna/exceptions/ExceptionUnmatchedClosingParentheses.java
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+/*
+ VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases.
+ Copyright (C) 2008  Kevin Darty, Alain Denise and Yann Ponty.
+ electronic mail : Yann.Ponty@lri.fr
+ paper mail : LRI, bat 490 Université Paris-Sud 91405 Orsay Cedex France
+
+ This file is part of VARNA version 3.1.
+ VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
+ as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+
+ VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
+ without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
+ See the GNU General Public License for more details.
+
+ You should have received a copy of the GNU General Public License along with VARNA version 3.1.
+ If not, see http://www.gnu.org/licenses.
+ */
+package fr.orsay.lri.varna.exceptions;
+
+import java.text.ParseException;
+
+/**
+ * Exception used when a rna has not the same number of opening and clothing
+ * parentheses
+ * 
+ * @author darty
+ * 
+ */
+public class ExceptionUnmatchedClosingParentheses extends ParseException {
+       /**
+        * 
+        */
+       private static final long serialVersionUID = 1L;
+
+       public ExceptionUnmatchedClosingParentheses(String s, int errorOffset) {
+               super(s, errorOffset);
+       }
+
+       public ExceptionUnmatchedClosingParentheses(int errorOffset) {
+               super("", errorOffset);
+       }
+
+       public String getMessage() {
+               return "Unbalanced parentheses expression, cannot resolve secondary structure.\n"
+                               + "Bad secondary structure (DBN format):Unmatched closing parentheses ')' at "
+                               + getErrorOffset();
+       }
+}