JAL-3210 Barebones gradle/buildship/eclipse. See README

[jalview.git] / srcjar / fr / orsay / lri / varna / models / templates / RNANodeValueTemplateBrokenBasePair.java

diff --git a/srcjar/fr/orsay/lri/varna/models/templates/RNANodeValueTemplateBrokenBasePair.java b/srcjar/fr/orsay/lri/varna/models/templates/RNANodeValueTemplateBrokenBasePair.java
deleted file mode 100644 (file)
index efa1679..0000000
--- a/srcjar/fr/orsay/lri/varna/models/templates/RNANodeValueTemplateBrokenBasePair.java
+++ /dev/null
@@ -1,47 +0,0 @@
-package fr.orsay.lri.varna.models.templates;
-
-import fr.orsay.lri.varna.models.templates.RNATemplate.RNATemplateHelix;
-
-/**
- * See RNANodeValueTemplate.
- * 
- * @author Raphael Champeimont
- */
-public class RNANodeValueTemplateBrokenBasePair extends RNANodeValueTemplate {
-       
-       /**
-        * The original template element this node came from.
-        */
-       private RNATemplateHelix helix;
-
-       /**
-        * The position (in the 5' to 3' order)
-        * of this base in the original helix.
-        */
-       private int positionInHelix;
-       
-       
-       
-       public String toGraphvizNodeName() {
-               return "BH[" + positionInHelix + "]";
-       }
-       
-       
-       
-       public RNATemplateHelix getHelix() {
-               return helix;
-       }
-
-       public void setHelix(RNATemplateHelix helix) {
-               this.helix = helix;
-       }
-
-       public int getPositionInHelix() {
-               return positionInHelix;
-       }
-
-       public void setPositionInHelix(int positionInHelix) {
-               this.positionInHelix = positionInHelix;
-       }
-       
-}