+++ /dev/null
-/*
- VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases.
- Copyright (C) 2008 Kevin Darty, Alain Denise and Yann Ponty.
- electronic mail : Yann.Ponty@lri.fr
- paper mail : LRI, bat 490 Université Paris-Sud 91405 Orsay Cedex France
-
- This file is part of VARNA version 3.1.
- VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
- as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
-
- VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
- without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
- See the GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License along with VARNA version 3.1.
- If not, see http://www.gnu.org/licenses.
- */
-package fr.orsay.lri.varna.views;
-
-import java.awt.BorderLayout;
-import java.awt.Color;
-import java.awt.Dimension;
-import java.awt.FlowLayout;
-import java.awt.GridLayout;
-import java.awt.geom.Point2D.Double;
-
-import javax.swing.JButton;
-import javax.swing.JLabel;
-import javax.swing.JPanel;
-import javax.swing.JSlider;
-import javax.swing.JTextArea;
-import javax.swing.border.Border;
-import javax.swing.plaf.basic.BasicBorders;
-
-import fr.orsay.lri.varna.VARNAPanel;
-import fr.orsay.lri.varna.controlers.ControleurSliderLabel;
-import fr.orsay.lri.varna.controlers.ControleurVueAnnotation;
-import fr.orsay.lri.varna.models.annotations.TextAnnotation;
-
-/**
- *
- * BH SwingJS using asynchronous JOptionPane.showConfirmDialog
- *
- * annoted text view for edition
- *
- * @author Darty@lri.fr
- *
- */
-public class VueAnnotation {
-
- protected VARNAPanel _vp;
- private JSlider ySlider, xSlider;
- private JButton colorButton;
- private JTextArea textArea;
- private JPanel panel;
- protected TextAnnotation textAnnotation, textAnnotationSave;
- private VueFont vueFont;
- private ControleurVueAnnotation _controleurVueAnnotation;
- protected boolean newAnnotation, limited;
- private Double position;
- private JSlider rotationSlider;
-
- /**
- * creates a view for a new annoted text
- *
- * @param vp
- * @param limited
- * if true, lets custom position and angle.
- */
- public VueAnnotation(VARNAPanel vp, boolean limited) {
- this(
- vp,
- (int) (vp.getExtendedRNABBox().x + vp.getExtendedRNABBox().width / 2.0),
- (int) (vp.getExtendedRNABBox().y + vp.getExtendedRNABBox().height / 2.0),
- limited);
- }
-
- /**
- * creates a view for a new annoted text, without limited option
- *
- * @param vp
- */
- public VueAnnotation(VARNAPanel vp) {
- this(vp, false);
- }
-
- /**
- * creates a view for a new annoted text at a given position, without
- * limited option
- *
- * @param vp
- */
- public VueAnnotation(VARNAPanel vp, int x, int y) {
- this(vp, x, y, false);
- }
-
- /**
- * creates a view for a new annoted text at a given position, without
- * limited option
- *
- * @param vp
- */
- public VueAnnotation(VARNAPanel vp, int x, int y, boolean limited) {
- this(vp, new TextAnnotation("", x, y), false, true);
- }
-
- /**
- * creates a view for an annoted text, without limited option
- *
- * @param vp
- * @param textAnnot
- */
- public VueAnnotation(VARNAPanel vp, TextAnnotation textAnnot,
- boolean newAnnotation) {
- this(vp, textAnnot, (textAnnot.getType()!=TextAnnotation.AnchorType.POSITION), newAnnotation);
- }
-
- /**
- * creates a view for an annoted text
- *
- *
- * @param vp
- * @param textAnnot
- * @param reduite
- * if true, lets custom position and angle.
- * @param newAnnotation
- * if true, deleted if cancelled.
- */
- public VueAnnotation(VARNAPanel vp, TextAnnotation textAnnot,
- boolean reduite, boolean newAnnotation) {
- this.limited = reduite;
- this.newAnnotation = newAnnotation;
- _vp = vp;
- textAnnotation = textAnnot;
- textAnnotationSave = textAnnotation.clone();
-
- if (!_vp.getListeAnnotations().contains(textAnnot)) {
- _vp.addAnnotation(textAnnotation);
- }
-
- _controleurVueAnnotation = new ControleurVueAnnotation(this);
-
- position = textAnnotation.getCenterPosition();
-
- /*
- * if (textAnnotation.getType() != TextAnnotation.POSITION) { position =
- * _vp.transformCoord(position); }
- */
-
- JPanel py = new JPanel();
- JPanel px = new JPanel();
- panel = new JPanel();
- panel.setLayout(new GridLayout(0, 1));
- py.setLayout(new FlowLayout(FlowLayout.LEFT));
- px.setLayout(new FlowLayout(FlowLayout.LEFT));
-
- ySlider = new JSlider(JSlider.HORIZONTAL, 0, (int) (_vp
- .getExtendedRNABBox().height), Math.max(0, Math.min((int) (_vp
- .getExtendedRNABBox().height), (int) (position.y - _vp
- .getExtendedRNABBox().y))));
- // Turn on labels at major tick marks.
- ySlider.setMajorTickSpacing(500);
- ySlider.setMinorTickSpacing(100);
- ySlider.setPaintTicks(true);
- ySlider.setPaintLabels(true);
- ySlider.setPreferredSize(new Dimension(400,
- ySlider.getPreferredSize().height));
-
- JLabel yValueLabel = new JLabel(String.valueOf((int) position.y
- - _vp.getExtendedRNABBox().y));
- yValueLabel.setPreferredSize(new Dimension(50, yValueLabel
- .getPreferredSize().height));
- ySlider
- .addChangeListener(new ControleurSliderLabel(yValueLabel, false));
- ySlider.addChangeListener(_controleurVueAnnotation);
-
- xSlider = new JSlider(JSlider.HORIZONTAL, 0, (int) (_vp
- .getExtendedRNABBox().width), Math.max(0, Math.min((int) _vp
- .getExtendedRNABBox().width, (int) (position.x - _vp
- .getExtendedRNABBox().x))));
- // Turn on labels at major tick marks.
- xSlider.setMajorTickSpacing(500);
- xSlider.setMinorTickSpacing(100);
- xSlider.setPaintTicks(true);
- xSlider.setPaintLabels(true);
- xSlider.setPreferredSize(new Dimension(400,
- xSlider.getPreferredSize().height));
-
- JLabel xValueLabel = new JLabel(String.valueOf((int) position.x
- - _vp.getExtendedRNABBox().x));
- xValueLabel.setPreferredSize(new Dimension(50, xValueLabel
- .getPreferredSize().height));
- xSlider
- .addChangeListener(new ControleurSliderLabel(xValueLabel, false));
- xSlider.addChangeListener(_controleurVueAnnotation);
-
- JLabel labelY = new JLabel("Y:");
- JLabel labelX = new JLabel("X:");
-
- py.add(labelY);
- py.add(ySlider);
- py.add(yValueLabel);
- px.add(labelX);
- px.add(xSlider);
- px.add(xValueLabel);
-
- /*if (!limited) {
- panel.add(px);
- panel.add(py);
- }*/
-
- JPanel panelTexte = new JPanel();
- panelTexte.setLayout(new BorderLayout());
- textArea = new JTextArea(textAnnotation.getTexte());
- textArea.addCaretListener(_controleurVueAnnotation);
- textArea.setPreferredSize(panelTexte.getSize());
- Border border = new BasicBorders.FieldBorder(Color.black, Color.black,
- Color.black, Color.black);
- textArea.setBorder(border);
- JLabel labelTexte = new JLabel("Text:");
- panelTexte.add(textArea, BorderLayout.CENTER);
- panelTexte.add(labelTexte, BorderLayout.NORTH);
- panel.add(panelTexte);
-
- vueFont = new VueFont(textAnnot.getFont());
- vueFont.getBoxPolice().addActionListener(_controleurVueAnnotation);
- vueFont.getSizeSlider().addChangeListener(_controleurVueAnnotation);
- vueFont.getStylesBox().addActionListener(_controleurVueAnnotation);
-
- colorButton = new JButton("Set color");
- colorButton.setActionCommand("setcolor");
- colorButton.setForeground(textAnnot.getColor());
- colorButton.addActionListener(_controleurVueAnnotation);
-
- JPanel fontAndColor = new JPanel();
- fontAndColor.add(vueFont.getPanel());
- fontAndColor.add(colorButton);
-
- panel.add(fontAndColor);
-
- JPanel rotationPanel = new JPanel();
-
- rotationSlider = new JSlider(JSlider.HORIZONTAL, -360, 360,
- (int) textAnnotation.getAngleInDegres());
- rotationSlider.setMajorTickSpacing(60);
- rotationSlider.setPaintTicks(true);
- rotationSlider.setPaintLabels(true);
- rotationSlider.setPreferredSize(new Dimension(500, 50));
-
- JLabel rotationLabel = new JLabel(String.valueOf(0));
- rotationLabel.setPreferredSize(new Dimension(50, rotationLabel
- .getPreferredSize().height));
- rotationSlider.addChangeListener(new ControleurSliderLabel(
- rotationLabel, false));
- rotationSlider.addChangeListener(_controleurVueAnnotation);
-
- JLabel labelZ = new JLabel("Rotation (degrees):");
-
- rotationPanel.add(labelZ);
- rotationPanel.add(rotationSlider);
- rotationPanel.add(rotationLabel);
-
- /*
- * if (!limited) { panel.add(rotationPanel); }
- */
-
- if (limited) {
- ySlider.setEnabled(false);
- xSlider.setEnabled(false);
- rotationSlider.setEnabled(false);
- }
- textArea.requestFocusInWindow();
-
- }
-
- private void applyFont() {
- textAnnotation.setFont(vueFont.getFont());
- }
-
- /**
- * update the annoted text on the VARNAPanel
- */
- public void update() {
- applyFont();
- if (textAnnotation.getType() == TextAnnotation.AnchorType.POSITION)
- textAnnotation.setAncrage((double) xSlider.getValue()
- + _vp.getExtendedRNABBox().x, ySlider.getValue()
- + _vp.getExtendedRNABBox().y);
- textAnnotation.setText(textArea.getText());
- textAnnotation.setAngleInDegres(rotationSlider.getValue());
- _vp.clearSelection();
- _vp.repaint();
- }
-
- public JPanel getPanel() {
- return panel;
- }
-
- /**
- *
- * @return the annoted text
- */
- public TextAnnotation getTextAnnotation() {
- return textAnnotation;
- }
-
- public VARNAPanel get_vp() {
- return _vp;
- }
-
- /**
- * shows the dialog which add it to the VARNAPanel for previsualization.
- * <p>
- * if validate, just update the annoted text
- * <p>
- * if cancelled : remove the annoted text if it was a new one, otherwise
- * cancel modifications
- * <p>
- *
- */
- public void show() {
- _vp.set_selectedAnnotation(textAnnotation);
- _vp.highlightSelectedAnnotation();
-
- // BH SwingjS using asynchronous dialog
- Runnable ok = new Runnable() {
-
- @Override
- public void run() {
- update();
- }
-
- };
-
- Runnable cancel = new Runnable() {
-
- @Override
- public void run() {
- if (newAnnotation) {
- _vp.set_selectedAnnotation(null);
- if (!_vp.removeAnnotation(textAnnotation))
- _vp.errorDialog(new Exception("Impossible de supprimer"));
- } else {
- textAnnotation.copy(textAnnotationSave);
- }
- }
-
- };
-
- Runnable final_ = new Runnable() {
-
- @Override
- public void run() {
- _vp.resetAnnotationHighlight();
- _vp.set_selectedAnnotation(null);
- _vp.repaint();
- }
-
- };
-
- _vp.getVARNAUI().showConfirmDialog(getPanel(), "Add/edit annotation", ok, cancel, cancel, final_);
- }
-
- public boolean isLimited() {
- return limited;
- }
-
- public void setLimited(boolean limited) {
- this.limited = limited;
- }
-
- public boolean isNewAnnotation() {
- return this.newAnnotation;
- }
-
- public void updateColor(Color c) {
- colorButton.setForeground(c);
- textAnnotation.setColor(c);
-
- }
-
-}
git://source.jalview.org / jalview.git / blobdiff