Merge branch 'develop' into improvement/JAL-4111_suffixed_DEVELOP_channels

[jalview.git] / test / jalview / analysis / CrossRefTest.java

diff --git a/test/jalview/analysis/CrossRefTest.java b/test/jalview/analysis/CrossRefTest.java
index 2970e3d..e693a7c 100644 (file)
--- a/test/jalview/analysis/CrossRefTest.java
+++ b/test/jalview/analysis/CrossRefTest.java
@@ -28,6 +28,16 @@ import static org.testng.AssertJUnit.assertNull;
 import static org.testng.AssertJUnit.assertSame;
 import static org.testng.AssertJUnit.assertTrue;
 
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.List;
+
+import org.testng.annotations.AfterClass;
+import org.testng.annotations.BeforeClass;
+import org.testng.annotations.BeforeMethod;
+import org.testng.annotations.Test;
+
+import jalview.bin.Cache;
 import jalview.datamodel.AlignedCodonFrame;
 import jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping;
 import jalview.datamodel.Alignment;
@@ -42,15 +52,6 @@ import jalview.util.DBRefUtils;
 import jalview.util.MapList;
 import jalview.ws.SequenceFetcher;
 import jalview.ws.SequenceFetcherFactory;
-import jalview.ws.params.InvalidArgumentException;
-
-import java.util.ArrayList;
-import java.util.Arrays;
-import java.util.List;
-
-import org.testng.annotations.AfterClass;
-import org.testng.annotations.BeforeClass;
-import org.testng.annotations.Test;
 
 public class CrossRefTest
 {
@@ -62,6 +63,12 @@ public class CrossRefTest
     JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
   }
 
+  @BeforeMethod(alwaysRun = true)
+  public void loadProperties()
+  {
+    Cache.loadProperties("test/jalview/util/comparisonTestProps.jvprops");
+  }
+
   @Test(groups = { "Functional" })
   public void testFindXDbRefs()
   {
@@ -187,6 +194,7 @@ public class CrossRefTest
     AlignmentI al = new Alignment(new SequenceI[] { emblSeq, uniprotSeq });
     Alignment xrefs = new CrossRef(new SequenceI[] { emblSeq }, al)
             .findXrefSequences("UNIPROT", true);
+    System.err.println("xrefs=" + xrefs);
     assertEquals(1, xrefs.getHeight());
     assertSame(uniprotSeq, xrefs.getSequenceAt(0));
   }